Strain identifier
BacDive ID: 5231
Type strain: 
Species: Yersinia nurmii
Strain Designation: ABF6a-c
Strain history: <- A. Murros-Kontiainen, Faculty Veterinary Medicine, Univ. Helsinki, Finland; ABF6a-c
NCBI tax ID(s): 685706 (species)
General
@ref: 16252
BacDive-ID: 5231
DSM-Number: 22297
keywords: 16S sequence, Bacteria, mesophilic
description: Yersinia nurmii ABF6a-c is a mesophilic bacterium that was isolated from broiler meat packaged under a modified atmosphere.
NCBI tax id
- NCBI tax id: 685706
- Matching level: species
strain history
- @ref: 16252
- history: <- A. Murros-Kontiainen, Faculty Veterinary Medicine, Univ. Helsinki, Finland; ABF6a-c
doi: 10.13145/bacdive5231.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Yersiniaceae
- genus: Yersinia
- species: Yersinia nurmii
- full scientific name: Yersinia nurmii Murros-Kontiainen et al. 2011
@ref: 16252
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Yersiniaceae
genus: Yersinia
species: Yersinia nurmii
full scientific name: Yersinia nurmii Murros-Kontiainen et al. 2011
strain designation: ABF6a-c
type strain: no
Culture and growth conditions
culture medium
- @ref: 16252
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 16252
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 16252
- sample type: broiler meat packaged under a modified atmosphere
- geographic location: Helsinki
- country: Finland
- origin.country: FIN
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Bottled, canned, packed food |
| #Engineered | #Food production | #Meat |
| #Host | #Birds | #Chicken |
Safety information
risk assessment
- @ref: 16252
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16252
- description: Yersinia nurmii strain ABF6a-c 16S ribosomal RNA gene, partial sequence
- accession: FJ717340
- length: 1484
- database: ena
- NCBI tax ID: 685706
GC content
- @ref: 16252
- GC-content: 48.7
- method: fluorimetric
External links
@ref: 16252
culture collection no.: DSM 22297
straininfo link
- @ref: 74723
- straininfo: 397034
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 16252 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22297) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22297 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 74723 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID397034.1 | StrainInfo: A central database for resolving microbial strain identifiers |