Strain identifier

BacDive ID: 5132

Type strain: Yes

Species: Serratia ficaria

Strain Designation: 4024

Culture col. no.: DSM 4569, ATCC 33105, CIP 79.23, ICPB 4050, CCUG 14507, NCTC 12148, LMG 7881, JCM 1241

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 1775

BacDive-ID: 5132

DSM-Number: 4569

keywords: mesophilic, Bacteria, 16S sequence

description: Serratia ficaria 4024 is a mesophilic bacterium that was isolated from fig.

strain history

doi: 10.13145/bacdive5132.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Serratia
  • species: Serratia ficaria
  • full scientific name: Serratia ficaria Grimont et al. 1981

@ref: 1775

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Yersiniaceae

genus: Serratia

species: Serratia ficaria

full scientific name: Serratia ficaria Grimont et al. 1981

strain designation: 4024

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
1775REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1a.pdf
33057MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)

culture temp

@refgrowthtypetemperaturerange
1775positivegrowth30mesophilic
33057positivegrowth30mesophilic

Physiology and metabolism

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOXNO2N2
1775+---+----+++++++++++-
1775+---+----+++++++++++-+-

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
1775-++++++-+-++++-+-+++-++++++++++++-++---+++-++++--+

API 50CHas

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
1775-++-+++---++++-+-+++--+-+++++-+++-++---++---++++++

Isolation, sampling and environmental information

isolation

@refsample typesampling date
1775fig
46119Calimyrna fig,Winters1977

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Tree
#Host Body-Site#Plant#Fruit (Seed)

Safety information

risk assessment

  • @ref: 1775
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Serratia ficaria gene for 16S ribosomal RNA, partial sequenceAB0047451449ena61651
20218Serratia ficaria gene for 16S rRNA, partial sequence, strain: NBRC 102596AB6818731467ena61651
20218Serratia ficaria partial 16S rRNA gene, strain NCTC 12148AJ2790541362ena61651
1775Serratia ficaria 16S rRNA gene (strain DSM 4569)AJ2334281495ena61651

External links

@ref: 1775

culture collection no.: DSM 4569, ATCC 33105, CIP 79.23, ICPB 4050, CCUG 14507, NCTC 12148, LMG 7881, JCM 1241

straininfo link

@refpassport
20218http://www.straininfo.net/strains/154931
20218http://www.straininfo.net/strains/21451
20218http://www.straininfo.net/strains/229507
20218http://www.straininfo.net/strains/21456

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1775Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4569)https://www.dsmz.de/collection/catalogue/details/culture/DSM-4569
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
33057Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/11049
46119Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 14507)https://www.ccug.se/strain?id=14507