Strain identifier
BacDive ID: 5132
Type strain: 
Species: Serratia ficaria
Strain Designation: 4024
Culture col. no.: DSM 4569, ATCC 33105, CIP 79.23, ICPB 4050, CCUG 14507, NCTC 12148, LMG 7881, JCM 1241
version 5.0 (current version)
General
@ref: 1775
BacDive-ID: 5132
DSM-Number: 4569
keywords: mesophilic, Bacteria, 16S sequence
description: Serratia ficaria 4024 is a mesophilic bacterium that was isolated from fig.
strain history
doi: 10.13145/bacdive5132.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/proteobacteria
- domain: Bacteria
- phylum: Proteobacteria
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Yersiniaceae
- genus: Serratia
- species: Serratia ficaria
- full scientific name: Serratia ficaria Grimont et al. 1981
@ref: 1775
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Yersiniaceae
genus: Serratia
species: Serratia ficaria
full scientific name: Serratia ficaria Grimont et al. 1981
strain designation: 4024
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 1775 | REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1a.pdf | |
| 33057 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 1775 | positive | growth | 30 | mesophilic |
| 33057 | positive | growth | 30 | mesophilic |
Physiology and metabolism
API 20E
| @ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | NO2 | N2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1775 | + | - | - | - | + | - | - | - | - | + | + | + | + | + | + | + | + | + | + | + | - | ||
| 1775 | + | - | - | - | + | - | - | - | - | + | + | + | + | + | + | + | + | + | + | + | - | + | - |
API 50CHac
| @ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1775 | - | + | + | + | + | + | + | - | + | - | + | + | + | + | - | + | - | + | + | + | - | + | + | + | + | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | + | + | - | + | + | + | + | - | - | + |
API 50CHas
| @ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1775 | - | + | + | - | + | + | + | - | - | - | + | + | + | + | - | + | - | + | + | + | - | - | + | - | + | + | + | + | + | - | + | + | + | - | + | + | - | - | - | + | + | - | - | - | + | + | + | + | + | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type | sampling date |
|---|---|---|
| 1775 | fig | |
| 46119 | Calimyrna fig,Winters | 1977 |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Tree |
| #Host Body-Site | #Plant | #Fruit (Seed) |
Safety information
risk assessment
- @ref: 1775
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Serratia ficaria gene for 16S ribosomal RNA, partial sequence | AB004745 | 1449 | ena | 61651 |
| 20218 | Serratia ficaria gene for 16S rRNA, partial sequence, strain: NBRC 102596 | AB681873 | 1467 | ena | 61651 |
| 20218 | Serratia ficaria partial 16S rRNA gene, strain NCTC 12148 | AJ279054 | 1362 | ena | 61651 |
| 1775 | Serratia ficaria 16S rRNA gene (strain DSM 4569) | AJ233428 | 1495 | ena | 61651 |
External links
@ref: 1775
culture collection no.: DSM 4569, ATCC 33105, CIP 79.23, ICPB 4050, CCUG 14507, NCTC 12148, LMG 7881, JCM 1241
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/154931 |
| 20218 | http://www.straininfo.net/strains/21451 |
| 20218 | http://www.straininfo.net/strains/229507 |
| 20218 | http://www.straininfo.net/strains/21456 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1775 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4569) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-4569 | |||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 33057 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/11049 | ||||
| 46119 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 14507) | https://www.ccug.se/strain?id=14507 |