Strain identifier
BacDive ID: 5127
Type strain: 
Species: Salmonella enterica subsp. arizonae
Culture col. no.: DSM 9386, ATCC 13314, CIP 8230, NCTC 8297, CCUG 6322
version 5.0 (current version)
General
@ref: 3566
BacDive-ID: 5127
DSM-Number: 9386
keywords: Bacteria, 16S sequence, genome sequence, mesophilic
description: Salmonella enterica subsp. arizonae DSM 9386 is a mesophilic bacterium of the family Enterobacteriaceae.
strain history: <- ATCC <- NCTC (Arizona arizonae)
doi: 10.13145/bacdive5127.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/proteobacteria
- domain: Bacteria
- phylum: Proteobacteria
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Salmonella
- species: Salmonella enterica subsp. arizonae
- full scientific name: Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987
synonyms
@ref synonym 20215 Paracolobactrum arizonae 20215 Salmonella choleraesuis subsp. arizonae 20215 Salmonella arizonae
@ref: 3566
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Enterobacteriaceae
genus: Salmonella
species: Salmonella enterica subsp. arizonae
full scientific name: Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 3566 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf | |
| 3566 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf | |
| 37325 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 3566 | positive | growth | 37 | mesophilic |
| 37325 | positive | growth | 30 | mesophilic |
Physiology and metabolism
API 20E
| @ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3566 | + | + | + | + | + | + | - | - | - | - | + | + | + | - | + | + | - | - | - | + | - |
| 3566 | + | + | + | + | + | + | - | - | - | + | - | + | + | - | + | + | - | + | - | + | - |
Isolation, sampling and environmental information
isolation
- @ref: 3566
- geographic location: Arizona
- country: USA
- origin.country: USA
- continent: North America
Safety information
risk assessment
- @ref: 3566
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Salmonella enterica subsp. arizonae strain ATCC 13314 16S ribosomal RNA gene, partial sequence | AF008580 | 1491 | ena | 59203 |
| 20218 | Salmonella enterica subsp. arizonae strain DSM 9386 16S ribosomal RNA gene, partial sequence | EU014683 | 1438 | ena | 59203 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Salmonella enterica subsp. arizonae SA20100345 | GCA_002234855 | complete | ncbi | 59203 |
| 66792 | Salmonella enterica subsp. arizonae CCUG 6322T | GCA_008692845 | contig | ncbi | 59203 |
| 66792 | Salmonella enterica subsp. arizonae BCW_2622 | GCA_002066295 | contig | ncbi | 59203 |
| 66792 | Salmonella enterica subsp. arizonae NCTC8297 | GCA_900456225 | contig | ncbi | 59203 |
| 66792 | Salmonella enterica subsp. arizonae strain 149300 | 59203.17 | wgs | patric | 59203 |
| 66792 | Salmonella enterica subsp. arizonae strain 516851 | 59203.16 | wgs | patric | 59203 |
| 66792 | Salmonella enterica subsp. arizonae strain CCUG 6322T | 59203.26 | wgs | patric | 59203 |
| 66792 | Salmonella enterica subsp. arizonae strain FDA00003365 | 59203.15 | wgs | patric | 59203 |
| 66792 | Salmonella enterica subsp. arizonae strain NCTC8297 | 59203.8 | wgs | patric | 59203 |
External links
@ref: 3566
culture collection no.: DSM 9386, ATCC 13314, CIP 8230, NCTC 8297, CCUG 6322
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/43345 |
| 20218 | http://www.straininfo.net/strains/43340 |
| 20218 | http://www.straininfo.net/strains/96853 |
| 20218 | http://www.straininfo.net/strains/43346 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 3566 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9386) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-9386 | |||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 37325 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/11299 | ||||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |