Strain identifier

BacDive ID: 5127

Type strain: Yes

Species: Salmonella enterica subsp. arizonae

Culture col. no.: DSM 9386, ATCC 13314, CIP 8230, NCTC 8297, CCUG 6322

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General

@ref: 3566

BacDive-ID: 5127

DSM-Number: 9386

keywords: Bacteria, 16S sequence, genome sequence, mesophilic

description: Salmonella enterica subsp. arizonae DSM 9386 is a mesophilic bacterium of the family Enterobacteriaceae.

strain history: <- ATCC <- NCTC (Arizona arizonae)

doi: 10.13145/bacdive5127.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Salmonella
  • species: Salmonella enterica subsp. arizonae
  • full scientific name: Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987
  • synonyms

    @refsynonym
    20215Paracolobactrum arizonae
    20215Salmonella choleraesuis subsp. arizonae
    20215Salmonella arizonae

@ref: 3566

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Enterobacteriaceae

genus: Salmonella

species: Salmonella enterica subsp. arizonae

full scientific name: Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3566COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
3566TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf
37325MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)

culture temp

@refgrowthtypetemperaturerange
3566positivegrowth37mesophilic
37325positivegrowth30mesophilic

Physiology and metabolism

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
3566++++++----+++-++---+-
3566++++++---+-++-++-+-+-

Isolation, sampling and environmental information

isolation

  • @ref: 3566
  • geographic location: Arizona
  • country: USA
  • origin.country: USA
  • continent: North America

Safety information

risk assessment

  • @ref: 3566
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Salmonella enterica subsp. arizonae strain ATCC 13314 16S ribosomal RNA gene, partial sequenceAF0085801491ena59203
20218Salmonella enterica subsp. arizonae strain DSM 9386 16S ribosomal RNA gene, partial sequenceEU0146831438ena59203

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Salmonella enterica subsp. arizonae SA20100345GCA_002234855completencbi59203
66792Salmonella enterica subsp. arizonae CCUG 6322TGCA_008692845contigncbi59203
66792Salmonella enterica subsp. arizonae BCW_2622GCA_002066295contigncbi59203
66792Salmonella enterica subsp. arizonae NCTC8297GCA_900456225contigncbi59203
66792Salmonella enterica subsp. arizonae strain 14930059203.17wgspatric59203
66792Salmonella enterica subsp. arizonae strain 51685159203.16wgspatric59203
66792Salmonella enterica subsp. arizonae strain CCUG 6322T59203.26wgspatric59203
66792Salmonella enterica subsp. arizonae strain FDA0000336559203.15wgspatric59203
66792Salmonella enterica subsp. arizonae strain NCTC829759203.8wgspatric59203

External links

@ref: 3566

culture collection no.: DSM 9386, ATCC 13314, CIP 8230, NCTC 8297, CCUG 6322

straininfo link

@refpassport
20218http://www.straininfo.net/strains/43345
20218http://www.straininfo.net/strains/43340
20218http://www.straininfo.net/strains/96853
20218http://www.straininfo.net/strains/43346

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
3566Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9386)https://www.dsmz.de/collection/catalogue/details/culture/DSM-9386
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
37325Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/11299
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)