Strain identifier
BacDive ID: 4837
Type strain: 
Species: Escherichia coli
Strain Designation: Z40, A178
Strain history: <- M. Achtman, A178
NCBI tax ID(s): 562 (species)
General
@ref: 4111
BacDive-ID: 4837
DSM-Number: 10780
keywords: Bacteria, mesophilic, human pathogen
description: Escherichia coli Z40 is a mesophilic human pathogen that was isolated from Patient with urinary tract infection.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
strain history
- @ref: 4111
- history: <- M. Achtman, A178
doi: 10.13145/bacdive4837.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 4111
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919
strain designation: Z40, A178
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link |
|---|---|---|---|
| 4111 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf |
| 4111 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf |
culture temp
- @ref: 4111
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 4111
- sample type: Patient with urinary tract infection
- geographic location: Seattle, Washington
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 |
|---|---|
| #Infection | #Disease |
| #Infection | #Patient |
| #Host Body-Site | #Urogenital tract |
Safety information
risk assessment
- @ref: 4111
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 4111
culture collection no.: DSM 10780
straininfo link
- @ref: 74335
- straininfo: 48924
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4111 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10780) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10780 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 74335 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48924.1 | StrainInfo: A central database for resolving microbial strain identifiers |