Strain identifier

BacDive ID: 4283

Type strain: Yes

Species: Halorhodospira halophila

Strain Designation: SL 1

Strain history: <- W.R. Sistrom, SL 1

NCBI tax ID(s): 349124 (strain), 1053 (species)

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General

@ref: 85

BacDive-ID: 4283

DSM-Number: 244

keywords: Bacteria, anaerobe, mesophilic

description: Halorhodospira halophila SL 1 is an anaerobe, mesophilic bacterium that was isolated from salt lake mud.

NCBI tax id

NCBI tax idMatching level
1053species
349124strain

strain history

  • @ref: 85
  • history: <- W.R. Sistrom, SL 1

doi: 10.13145/bacdive4283.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Chromatiales
  • family: Halorhodospiraceae
  • genus: Halorhodospira
  • species: Halorhodospira halophila
  • full scientific name: Halorhodospira halophila (Raymond and Sistrom 1969) Imhoff and Süling 1997
  • synonyms

    • @ref: 20215
    • synonym: Ectothiorhodospira halophila

@ref: 85

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Chromatiales

family: Ectothiorhodospiraceae

genus: Halorhodospira

species: Halorhodospira halophila

full scientific name: Halorhodospira halophila (Raymond and Sistrom 1969) Imhoff and Süling 1997

strain designation: SL 1

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 85
  • name: MEDIUM FOR ECTOTHIORHODOSPIRA (DSMZ Medium 253)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/253
  • composition: Name: MEDIUM FOR ECTOTHIORHODOSPIRA (DSMZ Medium 253) Composition: NaCl 178.042 g/l Na2SO4 19.7824 g/l NaHCO3 13.8477 g/l Na2CO3 5.93472 g/l Na2S x 9 H2O 0.98912 g/l Sodium succinate 0.98912 g/l NH4Cl 0.791296 g/l KH2PO4 0.49456 g/l Yeast extract 0.49456 g/l MgCl2 x 6 H2O 0.098912 g/l CaCl2 x 2 H2O 0.049456 g/l FeCl2 x 4 H2O 0.00178042 g/l H3BO3 0.00049456 g/l Nicotinamide 0.000346192 g/l Thiamine-HCl x 2 H2O 0.000296736 g/l CoCl2 x 6 H2O 0.00024728 g/l p-Aminobenzoic acid 0.000197824 g/l Calcium pantothenate 9.8912e-05 g/l Pyridoxal hydrochloride 9.8912e-05 g/l ZnCl2 9.8912e-05 g/l Biotin 9.8912e-05 g/l MnCl2 x 4 H2O 6.92384e-05 g/l Vitamin B12 4.9456e-05 g/l Na2MoO4 x 2 H2O 2.96736e-05 g/l Na2SeO3 x 5 H2O 9.8912e-06 g/l CuCl2 x 2 H2O 9.8912e-06 g/l NiCl2 x 6 H2O 9.8912e-06 g/l Distilled water

culture temp

  • @ref: 85
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 85
  • oxygen tolerance: anaerobe

compound production

  • @ref: 85
  • compound: carotenoids

Isolation, sampling and environmental information

isolation

  • @ref: 85
  • sample type: salt lake mud

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Environmental#Terrestrial#Mud (Sludge)
#Condition#Saline

Safety information

risk assessment

  • @ref: 85
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 85
  • GC-content: 68.4

External links

@ref: 85

culture collection no.: DSM 244

straininfo link

  • @ref: 73777
  • straininfo: 47111

literature

  • Pubmed-ID: 28035953
  • title: Arsenite as an Electron Donor for Anoxygenic Photosynthesis: Description of Three Strains of Ectothiorhodospira from Mono Lake, California and Big Soda Lake, Nevada.
  • authors: Hoeft McCann S, Boren A, Hernandez-Maldonado J, Stoneburner B, Saltikov CW, Stolz JF, Oremland RS
  • journal: Life (Basel)
  • DOI: 10.3390/life7010001
  • year: 2016

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
85Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 244)https://www.dsmz.de/collection/catalogue/details/culture/DSM-244
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
73777Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47111.1StrainInfo: A central database for resolving microbial strain identifiers