Strain identifier
BacDive ID: 4283
Type strain:
Species: Halorhodospira halophila
Strain Designation: SL 1
Strain history: <- W.R. Sistrom, SL 1
NCBI tax ID(s): 349124 (strain), 1053 (species)
General
@ref: 85
BacDive-ID: 4283
DSM-Number: 244
keywords: Bacteria, anaerobe, mesophilic
description: Halorhodospira halophila SL 1 is an anaerobe, mesophilic bacterium that was isolated from salt lake mud.
NCBI tax id
NCBI tax id | Matching level |
---|---|
1053 | species |
349124 | strain |
strain history
- @ref: 85
- history: <- W.R. Sistrom, SL 1
doi: 10.13145/bacdive4283.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Chromatiales
- family: Halorhodospiraceae
- genus: Halorhodospira
- species: Halorhodospira halophila
- full scientific name: Halorhodospira halophila (Raymond and Sistrom 1969) Imhoff and Süling 1997
synonyms
- @ref: 20215
- synonym: Ectothiorhodospira halophila
@ref: 85
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Chromatiales
family: Ectothiorhodospiraceae
genus: Halorhodospira
species: Halorhodospira halophila
full scientific name: Halorhodospira halophila (Raymond and Sistrom 1969) Imhoff and Süling 1997
strain designation: SL 1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 85
- name: MEDIUM FOR ECTOTHIORHODOSPIRA (DSMZ Medium 253)
- growth: yes
- link: https://mediadive.dsmz.de/medium/253
- composition: Name: MEDIUM FOR ECTOTHIORHODOSPIRA (DSMZ Medium 253) Composition: NaCl 178.042 g/l Na2SO4 19.7824 g/l NaHCO3 13.8477 g/l Na2CO3 5.93472 g/l Na2S x 9 H2O 0.98912 g/l Sodium succinate 0.98912 g/l NH4Cl 0.791296 g/l KH2PO4 0.49456 g/l Yeast extract 0.49456 g/l MgCl2 x 6 H2O 0.098912 g/l CaCl2 x 2 H2O 0.049456 g/l FeCl2 x 4 H2O 0.00178042 g/l H3BO3 0.00049456 g/l Nicotinamide 0.000346192 g/l Thiamine-HCl x 2 H2O 0.000296736 g/l CoCl2 x 6 H2O 0.00024728 g/l p-Aminobenzoic acid 0.000197824 g/l Calcium pantothenate 9.8912e-05 g/l Pyridoxal hydrochloride 9.8912e-05 g/l ZnCl2 9.8912e-05 g/l Biotin 9.8912e-05 g/l MnCl2 x 4 H2O 6.92384e-05 g/l Vitamin B12 4.9456e-05 g/l Na2MoO4 x 2 H2O 2.96736e-05 g/l Na2SeO3 x 5 H2O 9.8912e-06 g/l CuCl2 x 2 H2O 9.8912e-06 g/l NiCl2 x 6 H2O 9.8912e-06 g/l Distilled water
culture temp
- @ref: 85
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 85
- oxygen tolerance: anaerobe
compound production
- @ref: 85
- compound: carotenoids
Isolation, sampling and environmental information
isolation
- @ref: 85
- sample type: salt lake mud
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Lake (large) |
#Environmental | #Terrestrial | #Mud (Sludge) |
#Condition | #Saline |
Safety information
risk assessment
- @ref: 85
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 85
- GC-content: 68.4
External links
@ref: 85
culture collection no.: DSM 244
straininfo link
- @ref: 73777
- straininfo: 47111
literature
- Pubmed-ID: 28035953
- title: Arsenite as an Electron Donor for Anoxygenic Photosynthesis: Description of Three Strains of Ectothiorhodospira from Mono Lake, California and Big Soda Lake, Nevada.
- authors: Hoeft McCann S, Boren A, Hernandez-Maldonado J, Stoneburner B, Saltikov CW, Stolz JF, Oremland RS
- journal: Life (Basel)
- DOI: 10.3390/life7010001
- year: 2016
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
85 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 244) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-244 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
73777 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47111.1 | StrainInfo: A central database for resolving microbial strain identifiers |