Strain identifier
BacDive ID: 4236
Type strain:
Species: Desulfuromonas chloroethenica
Strain Designation: TT4B
Strain history: <- ATCC <- L.R. Krumholz, TT4B
NCBI tax ID(s): 93716 (species)
General
@ref: 4717
BacDive-ID: 4236
DSM-Number: 12431
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Desulfuromonas chloroethenica TT4B is an anaerobe, mesophilic bacterium that was isolated from freshwater sediment contaminated with chlorinated ethylenes.
NCBI tax id
- NCBI tax id: 93716
- Matching level: species
strain history
- @ref: 4717
- history: <- ATCC <- L.R. Krumholz, TT4B
doi: 10.13145/bacdive4236.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfuromonadales
- family: Desulfuromonadaceae
- genus: Desulfuromonas
- species: Desulfuromonas chloroethenica
- full scientific name: Desulfuromonas chloroethenica Krumholz 1997
synonyms
- @ref: 20215
- synonym: Trichloromonas chloroethenica
@ref: 4717
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfuromonadales
family: Desulfuromonadaceae
genus: Desulfuromonas
species: Desulfuromonas chloroethenica
full scientific name: Desulfuromonas chloroethenica Krumholz 1997
strain designation: TT4B
type strain: yes
Culture and growth conditions
culture medium
- @ref: 4717
- name: DESULFUROMONAS CHLOROETHENICA MEDIUM (DSMZ Medium 835)
- growth: yes
- link: https://mediadive.dsmz.de/medium/835
- composition: Name: DESULFUROMONAS CHLOROETHENICA MEDIUM (DSMZ Medium 835) Composition: Na2-fumarate 3.19043 g/l Na2CO3 1.74477 g/l KH2PO4 0.498504 g/l Na-acetate 0.408773 g/l NaCl 0.398804 g/l NH4Cl 0.398804 g/l MgCl2 x 6 H2O 0.299103 g/l Na2S x 9 H2O 0.249252 g/l L-Cysteine HCl x H2O 0.249252 g/l CaCl2 x 2 H2O 0.00997012 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 4717
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 4717
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 4717
- sample type: freshwater sediment contaminated with chlorinated ethylenes
- geographic location: eastern Massachusetts
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Contamination | |
#Environmental | #Aquatic | #Freshwater |
#Environmental | #Aquatic | #Sediment |
taxonmaps
- @ref: 69479
- File name: preview.99_38673.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_50;96_14327;97_22533;98_28355;99_38673&stattab=map
- Last taxonomy: Desulfuromonas chloroethenica subclade
- 16S sequence: NR_026012
- Sequence Identity:
- Total samples: 141
- soil counts: 18
- aquatic counts: 110
- animal counts: 6
- plant counts: 7
Safety information
risk assessment
- @ref: 4717
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 4717
- description: Desulfuromonas chloroethenica strain TT4B 16S ribosomal RNA, partial sequence
- accession: NR_026012
- length: 1502
- database: nuccore
- NCBI tax ID: 93716
External links
@ref: 4717
culture collection no.: DSM 12431, ATCC 700295
straininfo link
- @ref: 73733
- straininfo: 43866
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
4717 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12431) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-12431 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
73733 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID43866.1 | StrainInfo: A central database for resolving microbial strain identifiers |