Strain identifier

BacDive ID: 4215

Type strain: Yes

Species: Pelobacter acidigallici

Strain Designation: MaGal2

Strain history: <- B. Schink, MaGal2

NCBI tax ID(s): 35816 (species)

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General

@ref: 1059

BacDive-ID: 4215

DSM-Number: 2377

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Pelobacter acidigallici MaGal2 is an anaerobe, mesophilic bacterium that was isolated from mud.

NCBI tax id

  • NCBI tax id: 35816
  • Matching level: species

strain history

  • @ref: 1059
  • history: <- B. Schink, MaGal2

doi: 10.13145/bacdive4215.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfuromonadales
  • family: Desulfuromonadaceae
  • genus: Pelobacter
  • species: Pelobacter acidigallici
  • full scientific name: Pelobacter acidigallici Schink and Pfennig 1983

@ref: 1059

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfuromonadales

family: Desulfuromonadaceae

genus: Pelobacter

species: Pelobacter acidigallici

full scientific name: Pelobacter acidigallici Schink and Pfennig 1983

strain designation: MaGal2

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 1059
  • name: PROPIONIGENIUM MODESTUM MEDIUM (MARINE) (DSMZ Medium 293)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/293
  • composition: Name: PROPIONIGENIUM MODESTUM MEDIUM (MARINE) (DSMZ Medium 293; with strain-specific modifications) Composition: NaCl 19.98 g/l MgCl2 x 6 H2O 2.997 g/l Na2CO3 1.24875 g/l None 0.679321 g/l KCl 0.499501 g/l Na2S x 9 H2O 0.35964 g/l NH4Cl 0.24975 g/l KH2PO4 0.1998 g/l CaCl2 x 2 H2O 0.14985 g/l HCl 0.0024975 g/l FeCl2 x 4 H2O 0.0014985 g/l Sodium resazurin 0.0004995 g/l CoCl2 x 6 H2O 0.00018981 g/l MnCl2 x 4 H2O 9.99001e-05 g/l ZnCl2 6.99301e-05 g/l Na2MoO4 x 2 H2O 3.5964e-05 g/l NiCl2 x 6 H2O 2.3976e-05 g/l H3BO3 5.99401e-06 g/l CuCl2 x 2 H2O 1.998e-06 g/l Distilled water

culture temp

  • @ref: 1059
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 1059
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 1059
  • sample type: mud
  • geographic location: Venice
  • country: Italy
  • origin.country: ITA
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Mud (Sludge)

taxonmaps

  • @ref: 69479
  • File name: preview.99_21172.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_50;96_10731;97_12977;98_15968;99_21172&stattab=map
  • Last taxonomy: Pelobacter
  • 16S sequence: X77216
  • Sequence Identity:
  • Total samples: 80
  • soil counts: 8
  • aquatic counts: 64
  • animal counts: 8

Safety information

risk assessment

  • @ref: 1059
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 1059
  • description: P.acidigallici strain MaGa12-T (DSM 2377-T) 16S rRNA gene
  • accession: X77216
  • length: 1494
  • database: ena
  • NCBI tax ID: 35816

GC content

  • @ref: 1059
  • GC-content: 51.8

External links

@ref: 1059

culture collection no.: DSM 2377, ATCC 49970

straininfo link

  • @ref: 73715
  • straininfo: 45263

Reference

@idauthorscataloguedoi/urltitle
1059Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2377)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2377
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
73715Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID45263.1StrainInfo: A central database for resolving microbial strain identifiers