Strain identifier

BacDive ID: 4172

Type strain: Yes

Species: Maridesulfovibrio lacusfryxellense

Strain Designation: FSRs

Strain history: <- M. Madigan, Dept. Microbiology, Southern Illinois Univ., Carbondale, USA; FSRs <- W. M. Sattley {2004}

NCBI tax ID(s): 394294 (species)

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General

@ref: 16786

BacDive-ID: 4172

DSM-Number: 23315

keywords: 16S sequence, Bacteria, anaerobe, psychrophilic

description: Maridesulfovibrio lacusfryxellense FSRs is an anaerobe, psychrophilic bacterium that was isolated from surficial sediments of a permanently ice-covered, meromictic lake.

NCBI tax id

  • NCBI tax id: 394294
  • Matching level: species

strain history

  • @ref: 16786
  • history: <- M. Madigan, Dept. Microbiology, Southern Illinois Univ., Carbondale, USA; FSRs <- W. M. Sattley {2004}

doi: 10.13145/bacdive4172.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfovibrionales
  • family: Desulfovibrionaceae
  • genus: Maridesulfovibrio
  • species: Maridesulfovibrio lacusfryxellense
  • full scientific name: Maridesulfovibrio lacusfryxellense (Sattley and Madigan 2010) Galushko and Kuever 2021
  • synonyms

    • @ref: 20215
    • synonym: Desulfovibrio lacusfryxellense

@ref: 16786

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfovibrionales

family: Desulfovibrionaceae

genus: Desulfovibrio

species: Desulfovibrio lacusfryxellense

full scientific name: Desulfovibrio lacusfryxellense Sattley and Madigan 2010

strain designation: FSRs

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 16786
  • name: HALODESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 163)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/163
  • composition: Name: HALODESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 163) Composition: NaCl 25.0 g/l Na-DL-lactate 2.0 g/l MgSO4 x 7 H2O 2.0 g/l Yeast extract 1.0 g/l Na2SO4 1.0 g/l NH4Cl 1.0 g/l FeSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l Na-thioglycolate 0.1 g/l CaCl2 x 2 H2O 0.1 g/l Ascorbic acid 0.1 g/l Sodium resazurin 0.00049 g/l Distilled water

culture temp

  • @ref: 16786
  • growth: positive
  • type: growth
  • temperature: 20
  • range: psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 16786
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 16786
  • sample type: surficial sediments of a permanently ice-covered, meromictic lake
  • geographic location: Victoria Land, McMurdo Dry Valleys, Taylor Valley, Lake Fryxell
  • continent: Australia and Oceania

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Ice
#Environmental#Aquatic#Lake (large)
#Environmental#Aquatic#Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_182502.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_320;96_1303;97_1549;98_118909;99_182502&stattab=map
  • Last taxonomy: Desulfovibrio lacusfryxellense subclade
  • 16S sequence: DQ767889
  • Sequence Identity:
  • Total samples: 433
  • soil counts: 6
  • aquatic counts: 410
  • animal counts: 10
  • plant counts: 7

Sequence information

16S sequences

  • @ref: 16786
  • description: Desulfovibrio lacusfryxellense strain FSRs 16S ribosomal RNA gene, partial sequence
  • accession: DQ767889
  • length: 1495
  • database: ena
  • NCBI tax ID: 394294

External links

@ref: 16786

culture collection no.: DSM 23315, ATCC BAA 2083

literature

  • topic: Phylogeny
  • Pubmed-ID: 20473538
  • title: Temperature and nutrient induced responses of Lake Fryxell sulfate-reducing prokaryotes and description of Desulfovibrio lacusfryxellense, sp. nov., a pervasive, cold-active, sulfate-reducing bacterium from Lake Fryxell, Antarctica.
  • authors: Sattley WM, Madigan MT
  • journal: Extremophiles
  • DOI: 10.1007/s00792-010-0315-6
  • year: 2010
  • mesh: Antarctic Regions, Carbon/metabolism, DNA, Bacterial/genetics, Desulfovibrio/classification/genetics/isolation & purification/*metabolism, Microscopy, Electron, Scanning, Phylogeny, Polymerase Chain Reaction, Species Specificity, Sulfates/*metabolism, Temperature
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
16786Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23315)https://www.dsmz.de/collection/catalogue/details/culture/DSM-23315
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta