Strain identifier
BacDive ID: 4073
Type strain: 
Species: Desulfovibrio desulfuricans
Strain Designation: Essex 6
Strain history: <- G. Gottschalk, Universität Göttingen, Germany <- NCIB <- M. E. Adams and K. R. Butlin, National Chemical Laboratory, Teddington, Middlesex, U.K.; Essex 6 {1948}
NCBI tax ID(s): 1121445 (strain), 876 (species)
version 8.1 (current version)
General
@ref: 342
BacDive-ID: 4073
DSM-Number: 642
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic
description: Desulfovibrio desulfuricans Essex 6 is an anaerobe, mesophilic bacterium that was isolated from tar and sand mix around corroded gas main.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 876 | species |
| 1121445 | strain |
strain history
- @ref: 342
- history: <- G. Gottschalk, Universität Göttingen, Germany <- NCIB <- M. E. Adams and K. R. Butlin, National Chemical Laboratory, Teddington, Middlesex, U.K.; Essex 6 {1948}
doi: 10.13145/bacdive4073.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfovibrionales
- family: Desulfovibrionaceae
- genus: Desulfovibrio
- species: Desulfovibrio desulfuricans
- full scientific name: Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver and van Niel 1936 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Spirillum desulfuricans
@ref: 342
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfovibrionales
family: Desulfovibrionaceae
genus: Desulfovibrio
species: Desulfovibrio desulfuricans
full scientific name: Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver and van Niel 1936
strain designation: Essex 6
type strain: yes
Morphology
multimedia
| @ref | multimedia content | caption | intellectual property rights |
|---|---|---|---|
| 66793 | EM_DSM_642_1.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_642_2.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_642_3.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_642_4.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_642_5.jpg | electron microscopic image | © HZI/Manfred Rohde |
Culture and growth conditions
culture medium
- @ref: 342
- name: DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63)
- growth: yes
- link: https://mediadive.dsmz.de/medium/63
- composition: Name: DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63) Composition: MgSO4 x 7 H2O 2.0 g/l Na-DL-lactate 2.0 g/l NH4Cl 1.0 g/l Yeast extract 1.0 g/l Na2SO4 1.0 g/l FeSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l CaCl2 x 2 H2O 0.1 g/l Na-thioglycolate 0.1 g/l Ascorbic acid 0.1 g/l Sodium resazurin 0.0005 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 342 | positive | growth | 30 | mesophilic |
| 51996 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 342 | anaerobe |
| 51996 | anaerobe |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 51996 C14:0 0.4 14 51996 C15:0 1.1 15 51996 C16:0 9.9 16 51996 C17:0 0.7 17 51996 C18:0 0.4 18 51996 C14:0 ISO 3OH 8.8 15.117 51996 C15:0 ANTEISO 1.1 14.711 51996 C15:0 ISO 25.2 14.621 51996 C15:1 ISO F 0.8 14.414 51996 C15:1 ω5c 1.4 14.904 51996 C16:1 ISO H 0.4 15.461 51996 C16:1 ω7c 2.5 15.819 51996 C17:0 CYCLO 3.7 16.888 51996 C17:0 iso 4.1 16.629 51996 C17:0 iso 3OH 0.4 18.161 51996 C17:1 ISO I/C16:0 DMA 2.9 16.481 51996 C17:1 ω8c 0.3 16.792 51996 C17:1 ω9c ISO 27.5 16.416 51996 C18:1 ω9c 0.5 17.769 51996 C18:2 ω6,9c/C18:0 ANTE 4.6 17.724 51996 Unidentified 0.5 15.399 51996 Unidentified 0.3 16.288 51996 Unidentified 0.7 17.103 51996 unknown 13.566 1.4 13.566 51996 unknown 14.966 0.4 14.966 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 342 | tar and sand mix around corroded gas main | Essex | United Kingdom | GBR | Europe |
| 51996 | Tar-sand mixture in waterlogged clay | United Kingdom | GBR | Europe |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Engineered product |
| #Environmental | #Terrestrial | #Sandy |
taxonmaps
- @ref: 69479
- File name: preview.99_5729.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_139;96_2534;97_3382;98_4265;99_5729&stattab=map
- Last taxonomy: Desulfovibrio desulfuricans subclade
- 16S sequence: M34113
- Sequence Identity:
- Total samples: 4044
- soil counts: 63
- aquatic counts: 1282
- animal counts: 2617
- plant counts: 82
Safety information
risk assessment
- @ref: 342
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Desulfovibrio desulfuricans subsp. desulfuricans strain Essex 6 16S ribosomal RNA gene, complete sequence | AF192153 | 1542 | ena | 115117 |
| 20218 | Desulfovibrio desulfuricans subsp. desulfuricans Essex 6 16S-23S internal transcribed spacer region, partial sequence | AY033879 | 427 | ena | 115117 |
| 342 | Desulfovibrio desulfuricans strain ATCC 27774 16S ribosomal RNA gene, partial sequence | M34113 | 1551 | ena | 525146 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Desulfovibrio desulfuricans DSM 642 | GCA_000420465 | contig | ncbi | 1121445 |
| 66792 | Desulfovibrio desulfuricans subsp. desulfuricans DSM 642 | 1121445.4 | wgs | patric | 1121445 |
| 66792 | Desulfovibrio desulfuricans desulfuricans DSM 642 | 2524614548 | draft | img | 1121445 |
GC content
- @ref: 342
- GC-content: 57.4
- method: sequence analysis
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 85.93 | no |
| flagellated | yes | 51.917 | no |
| gram-positive | no | 98.746 | no |
| anaerobic | yes | 99.12 | no |
| aerobic | no | 97.829 | yes |
| halophile | no | 93.147 | no |
| spore-forming | no | 92.424 | no |
| thermophile | no | 97.16 | yes |
| glucose-util | no | 65.391 | no |
| glucose-ferment | no | 73.907 | no |
External links
@ref: 342
culture collection no.: DSM 642, ATCC 29577, NCIMB 8307, VKM B-1799, CCUG 34226, CIP 107039
straininfo link
- @ref: 73576
- straininfo: 47838
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 1859847 | Cloning and characterization of the flavodoxin gene from Desulfovibrio desulfuricans. | Helms LR, Swenson RP | Biochim Biophys Acta | 10.1016/0167-4781(91)90190-w | 1991 | Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Bacterial, Desulfovibrio/*genetics, Flavodoxin/*genetics, Genes, Bacterial, Molecular Sequence Data, Restriction Mapping | Genetics |
| Phylogeny | 2361938 | Diversity and origin of Desulfovibrio species: phylogenetic definition of a family. | Devereux R, He SH, Doyle CL, Orkland S, Stahl DA, LeGall J, Whitman WB | J Bacteriol | 10.1128/jb.172.7.3609-3619.1990 | 1990 | Base Sequence, Biological Evolution, Culture Media, Desulfovibrio/classification/*genetics/growth & development, Molecular Sequence Data, Oligonucleotide Probes, *Phylogeny, RNA, Ribosomal/genetics, RNA, Ribosomal, 16S/genetics | Cultivation |
| Genetics | 8785498 | 1H and 15N NMR resonance assignments and solution secondary structure of oxidized Desulfovibrio desulfuricans flavodoxin. | Pollock JR, Swenson RP, Stockman BJ | J Biomol NMR | 10.1007/BF00202039 | 1996 | Amino Acid Sequence, Desulfovibrio/chemistry/genetics, Desulfovibrio vulgaris/chemistry/genetics, Flavodoxin/*chemistry/genetics, Hydrogen/chemistry, Magnetic Resonance Spectroscopy, Molecular Sequence Data, Nitrogen Isotopes, Oxidation-Reduction, Protein Structure, Secondary, Sequence Homology, Amino Acid, Solutions, Species Specificity | Phylogeny |
| Pathogenicity | 8795227 | Intraspecies variability of cellular fatty acids among soil and intestinal strains of Desulfovibrio desulfuricans. | Dzierzewicz Z, Cwalina B, Kurkiewicz S, Chodurek E, Wilczok T | Appl Environ Microbiol | 10.1128/aem.62.9.3360-3365.1996 | 1996 | Desulfovibrio/*chemistry, Fatty Acids/*analysis, Humans, Intestines/*microbiology, *Soil Microbiology, Species Specificity | Phylogeny |
| Metabolism | 8882004 | Physiologic studies with the sulfate-reducing bacterium Desulfovibrio desulfuricans: evaluation for use in a biofuel cell. | Cooney MJ, Roschi E, Marison IW, Comninellis C, von Stockar U | Enzyme Microb Technol | 10.1016/0141-0229(95)00132-8 | 1996 | Biomass, Cell Division, Desulfovibrio/*metabolism, Electricity, Hydrogen Sulfide/metabolism, Kinetics, Lactic Acid/pharmacology, Models, Chemical, Oxidation-Reduction, Pyruvic Acid/metabolism, Sulfates/*metabolism | Enzymology |
| Phylogeny | 10380647 | Isolation of Desulfovibrio intestinalis sp. nov. from the hindgut' of the lower termite Mastotermes darwiniensis. | Frohlich J, Sass H, Babenzien HD, Kuhnigk T, Varma A, Saxena S, Nalepa C, Pfeiffer P, Konig H | Can J Microbiol | 10.1139/w98-222 | 1999 | Animals, Base Sequence, Desulfovibrio/classification/*isolation & purification/physiology/ultrastructure, Intestines/microbiology, Isoptera/*microbiology, Microscopy, Electron, Molecular Sequence Data, Phylogeny | Genetics |
| Enzymology | 11160104 | Dissimilatory sulfite reductase (desulfoviridin) of the taurine-degrading, non-sulfate-reducing bacterium Bilophila wadsworthia RZATAU contains a fused DsrB-DsrD subunit. | Laue H, Friedrich M, Ruff J, Cook AM | J Bacteriol | 10.1128/JB.183.5.1727-1733.2001 | 2001 | Amino Acid Sequence, Anaerobiosis, Deltaproteobacteria/*enzymology/genetics/growth & development, Electrophoresis, Polyacrylamide Gel, Molecular Sequence Data, Oxidoreductases/metabolism, Oxidoreductases Acting on Sulfur Group Donors/*genetics/isolation & purification/*metabolism, Phylogeny, Sequence Analysis, DNA, Sulfates/metabolism, Sulfites/metabolism, Taurine/*metabolism | Metabolism |
| Metabolism | 11185657 | Volatile sulfur production by pig cecal bacteria in batch culture and screening inhibitors of sulfate reducing bacteria. | Arakawa T, Ishikawa Y, Ushida K | J Nutr Sci Vitaminol (Tokyo) | 10.3177/jnsv.46.193 | 2000 | Alkanesulfonic Acids/*pharmacology, Animals, Cecum/*microbiology, Chromatography, Gas, Desulfovibrio/drug effects/*metabolism, Hydrogen Sulfide/antagonists & inhibitors/metabolism, Magnoliopsida/chemistry, Molybdenum/*pharmacology, Pigments, Biological/chemistry, Sulfur Compounds/antagonists & inhibitors/*metabolism, Swine, Volatilization | Biotechnology |
| Genetics | 11358521 | Spectroscopic investigation and determination of reactivity and structure of the tetraheme cytochrome c3 from Desulfovibrio desulfuricans Essex 6. | Einsle O, Foerster S, Mann K, Fritz G, Messerschmidt A, Kroneck PM | Eur J Biochem | 10.1046/j.1432-1327.2001.02195.x | 2001 | Amino Acid Sequence, Benzoquinones/chemistry, Cell Division, Cytochrome c Group/*chemistry/*metabolism/physiology, Desulfovibrio/*chemistry, Electron Spin Resonance Spectroscopy, Electron Transport, Electrons, Heme/chemistry, Models, Molecular, Molecular Sequence Data, Periplasm/chemistry, Protein Binding, Sequence Analysis, Protein, Spectrophotometry, Ultraviolet Rays, X-Ray Diffraction | Transcriptome |
| Phylogeny | 12148644 | Reclassification of the only species of the genus Desulfomonas, Desulfomonas pigra, as Desulfovibrio piger comb. nov. | Loubinoux J, Valente FM, Pereira IA, Costa A, Grimont PA, Le Faou AE | Int J Syst Evol Microbiol | 10.1099/00207713-52-4-1305 | 2002 | Base Composition, DNA, Ribosomal/analysis, DNA, Ribosomal Spacer/analysis, Deltaproteobacteria/*classification/genetics/growth & development, Desulfovibrio/*classification/genetics/growth & development, Humans, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, RNA, Ribosomal, 23S/genetics, Sequence Analysis, DNA, Species Specificity, Sulfur-Reducing Bacteria/classification/genetics/growth & development | Pathogenicity |
| Metabolism | 12325145 | Bioreduction and biocrystallization of palladium by Desulfovibrio desulfuricans NCIMB 8307. | Yong P, Rowson NA, Farr JP, Harris IR, Macaskie LE | Biotechnol Bioeng | 10.1002/bit.10369 | 2002 | Catalysis, Cell Count, Crystallization/*methods, Desulfovibrio/genetics/*metabolism, Formates/*metabolism, Hydrogen/*metabolism, Hydrogen-Ion Concentration, Industrial Waste/prevention & control, Oxidation-Reduction, Palladium/chemistry/*metabolism, Particle Size, Sensitivity and Specificity, Temperature, Waste Management/*methods | Biotechnology |
| 14618696 | Mutual influences of Pseudomonas aeruginosa and Desulfovibrio desulfuricans on their adhesion to stainless steel. | Medilanski E, Wick LY, Wanner O, Harms H | Biofouling | 10.1080/0892701021000030133 | 2003 | Bacterial Adhesion/*physiology, *Biofilms, Desulfovibrio desulfuricans/*physiology, Ecosystem, Pseudomonas aeruginosa/*physiology, Rheology, *Stainless Steel, Static Electricity | ||
| Metabolism | 15211494 | Reduction of Cr(VI) by "palladized" biomass of Desulfovibrio desulfuricans ATCC 29577. | Mabbett AN, Yong P, Farr JP, Macaskie LE | Biotechnol Bioeng | 10.1002/bit.20105 | 2004 | Biomass, Catalysis, Chromium/*metabolism, Desulfovibrio desulfuricans/*growth & development, Formates/*metabolism, Hydrogen/*metabolism, Oxidation-Reduction, Palladium/*chemistry | |
| Biotechnology | 16509351 | Biorecovered precious metals from industrial wastes: single-step conversion of a mixed metal liquid waste to a bioinorganic catalyst with environmental application. | Mabbett AN, Sanyahumbi D, Yong P, Macaskie LE | Environ Sci Technol | 10.1021/es0509836 | 2006 | Biomass, *Bioreactors, Catalysis, Chromium/*chemistry, *Conservation of Natural Resources, Desulfovibrio desulfuricans/physiology, Escherichia coli, Industrial Waste, Oxidation-Reduction, Palladium/*isolation & purification | Enzymology |
| Metabolism | 16570313 | Chromate reduction by immobilized palladized sulfate-reducing bacteria. | Humphries AC, Mikheenko IP, Macaskie LE | Biotechnol Bioeng | 10.1002/bit.20814 | 2006 | Cells, Immobilized/metabolism, Chromates/*pharmacokinetics, Desulfovibrio desulfuricans/growth & development/*metabolism/ultrastructure, Desulfovibrio vulgaris/growth & development/*metabolism/ultrastructure, Oxidation-Reduction, Palladium/*chemistry/*metabolism, Species Specificity | Phylogeny |
| Enzymology | 16849807 | Succinate dehydrogenase functioning by a reverse redox loop mechanism and fumarate reductase in sulphate-reducing bacteria. | Zaunmuller T, Kelly DJ, Glockner FO, Unden G | Microbiology (Reading) | 10.1099/mic.0.28849-0 | 2006 | Amino Acid Sequence, Desulfovibrio/*enzymology/genetics, Fumarates/metabolism, Molecular Sequence Data, Multigene Family, Oxidation-Reduction, Succinate Dehydrogenase/*physiology, Succinic Acid/metabolism, Sulfates/*metabolism | Metabolism |
| Metabolism | 19130259 | Reduction of molybdate by sulfate-reducing bacteria. | Biswas KC, Woodards NA, Xu H, Barton LL | Biometals | 10.1007/s10534-008-9198-8 | 2009 | Bacterial Proteins/genetics/metabolism, Biological Transport/physiology, Desulfovibrio/genetics/*physiology, *Molybdenum/chemistry/metabolism, Oxidation-Reduction, Seawater/chemistry, Sulfates/chemistry/*metabolism | |
| Metabolism | 19465766 | Pseudosymmetry, high copy number and twinning complicate the structure determination of Desulfovibrio desulfuricans (ATCC 29577) flavodoxin. | Guelker M, Stagg L, Wittung-Stafshede P, Shamoo Y | Acta Crystallogr D Biol Crystallogr | 10.1107/S0907444909010075 | 2009 | Bacterial Proteins/*chemistry/metabolism, Crystallization, *Crystallography, X-Ray, Desulfovibrio desulfuricans/*physiology, Electron Transport/physiology, Flavin Mononucleotide/*chemistry/metabolism, Flavodoxin/*chemistry/metabolism, Models, Chemical, Oxidation-Reduction, Protein Binding, Protein Conformation, Stereoisomerism | |
| Pathogenicity | 19786606 | Susceptibilities of 23 Desulfovibrio isolates from humans. | Nakao K, Tanaka K, Ichiishi S, Mikamo H, Shibata T, Watanabe K | Antimicrob Agents Chemother | 10.1128/AAC.00630-09 | 2009 | Ampicillin/pharmacology, Anti-Bacterial Agents/*pharmacology, Chloramphenicol, Clindamycin/pharmacology, Desulfovibrio/*classification/*drug effects, Fluoroquinolones/pharmacology, Humans, Metronidazole/pharmacology, Microbial Sensitivity Tests, Penicillanic Acid/analogs & derivatives/pharmacology, Piperacillin/pharmacology, Piperacillin, Tazobactam Drug Combination, Sulbactam/pharmacology | Phylogeny |
| Pathogenicity | 20159048 | First isolation of Desulfovibrio from the human vaginal flora. | Ichiishi S, Tanaka K, Nakao K, Izumi K, Mikamo H, Watanabe K | Anaerobe | 10.1016/j.anaerobe.2010.02.002 | 2010 | Adult, Aged, Anti-Bacterial Agents/pharmacology, Desulfovibrio/drug effects/*isolation & purification, Drug Resistance, Bacterial, Female, Humans, Japan, Microbial Sensitivity Tests, Middle Aged, Vagina/*microbiology | Phylogeny |
| Enzymology | 24194097 | Hydrogenase activity of mineral-associated and suspended populations of Desulfovibrio desulfuricans Essex 6. | Reardon CL, Magnuson TS, Boyd ES, Leavitt WD, Reed DW, Geesey GG | Microb Ecol | 10.1007/s00248-013-0308-y | 2013 | Biofilms, DNA, Bacterial/genetics, Desulfovibrio desulfuricans/*enzymology/isolation & purification, Ferric Compounds/*chemistry, Hydrogen/chemistry, Hydrogenase/genetics/*metabolism, Iron/chemistry, Minerals/chemistry, Oxidation-Reduction, Sequence Analysis, DNA, Sulfates/chemistry | Transcriptome |
| 27004043 | Characterization of intracellular palladium nanoparticles synthesized by Desulfovibrio desulfuricans and Bacillus benzeovorans. | Omajali JB, Mikheenko IP, Merroun ML, Wood J, Macaskie LE | J Nanopart Res | 10.1007/s11051-015-3067-5 | 2015 | |||
| Phylogeny | 27392787 | Pseudodesulfovibrio indicus gen. nov., sp. nov., a piezophilic sulfate-reducing bacterium from the Indian Ocean and reclassification of four species of the genus Desulfovibrio. | Cao J, Gayet N, Zeng X, Shao Z, Jebbar M, Alain K | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001286 | 2016 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Desulfovibrio/*classification/genetics/isolation & purification, Fatty Acids/chemistry, Indian Ocean, Oxidation-Reduction, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sulfur-Reducing Bacteria/*classification/genetics/isolation & purification | Enzymology |
| Metabolism | 30718429 | A glycyl radical enzyme enables hydrogen sulfide production by the human intestinal bacterium Bilophila wadsworthia. | Peck SC, Denger K, Burrichter A, Irwin SM, Balskus EP, Schleheck D | Proc Natl Acad Sci U S A | 10.1073/pnas.1815661116 | 2019 | Alcohol Oxidoreductases/chemistry/*genetics/metabolism, Anaerobiosis/genetics, Bilophila/chemistry/*enzymology/metabolism, Gastrointestinal Microbiome/genetics, Humans, Hydrogen Sulfide/chemistry/*metabolism, Oxidation-Reduction, *Proteomics, Taurine/metabolism | Enzymology |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 342 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 642) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-642 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 51996 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 34226) | https://www.ccug.se/strain?id=34226 | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 66793 | Mukherjee et al. | 10.1038/nbt.3886 | GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life | 35: 676-683 2017 | 28604660 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 73576 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47838.1 | StrainInfo: A central database for resolving microbial strain identifiers |