Strain identifier
BacDive ID: 3962
Type strain:
Species: Desulfobacter halotolerans
Strain Designation: GSL-Ac1
Strain history: <- K. Ingvorsen, University of Aarhus, Department of Microbiology, Institute of Biological Sciences, Denmark; GSL-Ac1 <- K. K. Brandt {1994}
NCBI tax ID(s): 65380 (species)
General
@ref: 4335
BacDive-ID: 3962
DSM-Number: 11383
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Desulfobacter halotolerans GSL-Ac1 is an anaerobe, mesophilic bacterium that was isolated from surface sediment.
NCBI tax id
- NCBI tax id: 65380
- Matching level: species
strain history
- @ref: 4335
- history: <- K. Ingvorsen, University of Aarhus, Department of Microbiology, Institute of Biological Sciences, Denmark; GSL-Ac1 <- K. K. Brandt {1994}
doi: 10.13145/bacdive3962.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfobacterales
- family: Desulfobacteraceae
- genus: Desulfobacter
- species: Desulfobacter halotolerans
- full scientific name: Desulfobacter halotolerans Brandt and Ingvorsen 1998
@ref: 4335
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfobacterales
family: Desulfobacteraceae
genus: Desulfobacter
species: Desulfobacter halotolerans
full scientific name: Desulfobacter halotolerans Brandt and Ingvorsen 1998
strain designation: GSL-Ac1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 4335
- name: DESULFOBACTER MEDIUM (DSMZ Medium 195)
- growth: yes
- link: https://mediadive.dsmz.de/medium/195
- composition: Name: DESULFOBACTER MEDIUM (DSMZ Medium 195) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Na-acetate x 3 H2O 2.49252 g/l Na2CO3 1.49551 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 4335
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 4335
- oxygen tolerance: anaerobe
compound production
- @ref: 4335
Isolation, sampling and environmental information
isolation
- @ref: 4335
- sample type: surface sediment
- geographic location: Utah, Great Salt Lake
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Sediment
taxonmaps
- @ref: 69479
- File name: preview.99_24883.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_40;96_3037;97_7397;98_9118;99_24883&stattab=map
- Last taxonomy: Desulfobacter halotolerans subclade
- 16S sequence: Y14745
- Sequence Identity:
- Total samples: 932
- soil counts: 42
- aquatic counts: 835
- animal counts: 49
- plant counts: 6
Safety information
risk assessment
- @ref: 4335
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 4335
- description: Desulfobacter halotolerans 16S rRNA gene, partial
- accession: Y14745
- length: 1472
- database: ena
- NCBI tax ID: 65380
GC content
- @ref: 4335
- GC-content: 49
- method: high performance liquid chromatography (HPLC)
External links
@ref: 4335
culture collection no.: DSM 11383
straininfo link
- @ref: 73471
- straininfo: 49090
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
4335 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11383) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11383 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
73471 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49090.1 | StrainInfo: A central database for resolving microbial strain identifiers |