Strain identifier
BacDive ID: 3907
Type strain:
Species: Brachybacterium conglomeratum
Strain Designation: 3-8
Strain history: CIP <- 1989, NCIB, Brachybacterium faecium <- H.E. Schefferle: strain 3-8
NCBI tax ID(s): 47846 (species)
General
@ref: 12530
BacDive-ID: 3907
DSM-Number: 46339
keywords: 16S sequence, Bacteria, mesophilic
description: Brachybacterium conglomeratum 3-8 is a mesophilic bacterium that was isolated from poultry deep litter.
NCBI tax id
- NCBI tax id: 47846
- Matching level: species
strain history
@ref | history |
---|---|
12530 | <- IMET (Brachybacterium faecium) <- IMV, Kiew <- NCIB <- H.E. Schefferle, 3-8 |
118731 | CIP <- 1989, NCIB, Brachybacterium faecium <- H.E. Schefferle: strain 3-8 |
doi: 10.13145/bacdive3907.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Dermabacteraceae
- genus: Brachybacterium
- species: Brachybacterium conglomeratum
- full scientific name: Brachybacterium conglomeratum (ex Migula 1900) Takeuchi et al. 1995
@ref: 12530
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Dermabacteraceae
genus: Brachybacterium
species: Brachybacterium conglomeratum
full scientific name: Brachybacterium conglomeratum (ex Migula 1900) Takeuchi et al. 1995
strain designation: 3-8
type strain: no
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
12530 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
34249 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
118731 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
12530 | positive | growth | 28 | mesophilic |
34249 | positive | growth | 30 | mesophilic |
Physiology and metabolism
murein
- @ref: 12530
- murein short key: A31.02
- type: A4gamma m-Dpm-D-Glu2; alpha-carboxyl group of D-Glu substituted by glycine
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
12530 | poultry deep litter |
118731 | Other, Poultry, deep litter |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Waste | |
#Host | #Birds | |
#Host | #Other | #Decomposing animal |
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
12530 | 1 | Risk group (German classification) |
118731 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 12530
- description: B.conglomeratum 16S ribosomal RNA gene
- accession: X91030
- length: 1513
- database: ena
- NCBI tax ID: 47846
GC content
- @ref: 12530
- GC-content: 71.5
External links
@ref: 12530
culture collection no.: DSM 46339, IMET 11351, NCIB 9859, CIP 103332, IFO 15223, NCIMB 9859, VKM Ac-1424, NBRC 15223
straininfo link
- @ref: 73417
- straininfo: 126056
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
12530 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46339) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46339 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
34249 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15118 | ||
73417 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID126056.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
118731 | Curators of the CIP | Collection of Institut Pasteur (CIP 103332) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103332 |