Strain identifier

BacDive ID: 3907

Type strain: No

Species: Brachybacterium conglomeratum

Strain Designation: 3-8

Strain history: CIP <- 1989, NCIB, Brachybacterium faecium <- H.E. Schefferle: strain 3-8

NCBI tax ID(s): 47846 (species)

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General

@ref: 12530

BacDive-ID: 3907

DSM-Number: 46339

keywords: 16S sequence, Bacteria, mesophilic

description: Brachybacterium conglomeratum 3-8 is a mesophilic bacterium that was isolated from poultry deep litter.

NCBI tax id

  • NCBI tax id: 47846
  • Matching level: species

strain history

@refhistory
12530<- IMET (Brachybacterium faecium) <- IMV, Kiew <- NCIB <- H.E. Schefferle, 3-8
118731CIP <- 1989, NCIB, Brachybacterium faecium <- H.E. Schefferle: strain 3-8

doi: 10.13145/bacdive3907.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Dermabacteraceae
  • genus: Brachybacterium
  • species: Brachybacterium conglomeratum
  • full scientific name: Brachybacterium conglomeratum (ex Migula 1900) Takeuchi et al. 1995

@ref: 12530

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Dermabacteraceae

genus: Brachybacterium

species: Brachybacterium conglomeratum

full scientific name: Brachybacterium conglomeratum (ex Migula 1900) Takeuchi et al. 1995

strain designation: 3-8

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
12530TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
34249MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
118731CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
12530positivegrowth28mesophilic
34249positivegrowth30mesophilic

Physiology and metabolism

murein

  • @ref: 12530
  • murein short key: A31.02
  • type: A4gamma m-Dpm-D-Glu2; alpha-carboxyl group of D-Glu substituted by glycine

Isolation, sampling and environmental information

isolation

@refsample type
12530poultry deep litter
118731Other, Poultry, deep litter

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste
#Host#Birds
#Host#Other#Decomposing animal

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
125301Risk group (German classification)
1187311Risk group (French classification)

Sequence information

16S sequences

  • @ref: 12530
  • description: B.conglomeratum 16S ribosomal RNA gene
  • accession: X91030
  • length: 1513
  • database: ena
  • NCBI tax ID: 47846

GC content

  • @ref: 12530
  • GC-content: 71.5

External links

@ref: 12530

culture collection no.: DSM 46339, IMET 11351, NCIB 9859, CIP 103332, IFO 15223, NCIMB 9859, VKM Ac-1424, NBRC 15223

straininfo link

  • @ref: 73417
  • straininfo: 126056

Reference

@idauthorscataloguedoi/urltitle
12530Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46339)https://www.dsmz.de/collection/catalogue/details/culture/DSM-46339
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
34249Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15118
73417Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID126056.1StrainInfo: A central database for resolving microbial strain identifiers
118731Curators of the CIPCollection of Institut Pasteur (CIP 103332)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103332