Strain identifier
BacDive ID: 3868
Type strain: 
Species: Deinococcus frigens
Strain Designation: AA-829
Strain history: <- P. Hirsch; AA-829
NCBI tax ID(s): 249403 (species)
version 8.1 (current version)
General
@ref: 6228
BacDive-ID: 3868
DSM-Number: 15994
keywords: 16S sequence, Bacteria, psychrophilic
description: Deinococcus frigens AA-829 is a psychrophilic bacterium that was isolated from soil .
NCBI tax id
- NCBI tax id: 249403
- Matching level: species
strain history
- @ref: 6228
- history: <- P. Hirsch; AA-829
doi: 10.13145/bacdive3868.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/deinococcota
- domain: Bacteria
- phylum: Deinococcota
- class: Deinococci
- order: Deinococcales
- family: Deinococcaceae
- genus: Deinococcus
- species: Deinococcus frigens
- full scientific name: Deinococcus frigens Hirsch et al. 2006
@ref: 6228
domain: Bacteria
phylum: Deinococcus-Thermus
class: Deinococci
order: Deinococcales
family: Deinococcaceae
genus: Deinococcus
species: Deinococcus frigens
full scientific name: Deinococcus frigens Hirsch et al. 2006
strain designation: AA-829
type strain: no
Culture and growth conditions
culture medium
- @ref: 6228
- name: PYGV AGAR (DSMZ Medium 621)
- growth: yes
- link: https://mediadive.dsmz.de/medium/621
- composition: Name: PYGV AGAR (DSMZ Medium 621) Composition: Agar 15.0 g/l MgSO4 x 7 H2O 0.625264 g/l Glucose 0.25 g/l Peptone 0.25 g/l Yeast extract 0.25 g/l Nitrilotriacetic acid 0.210526 g/l CaCl2 x 2 H2O 0.0703158 g/l FeSO4 x 7 H2O 0.00208422 g/l Na2MoO4 x 2 H2O 0.000266736 g/l Pyridoxine hydrochloride 0.0001 g/l p-Aminobenzoic acid 5e-05 g/l D-Calcium pantothenate 5e-05 g/l Nicotinamide 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l Riboflavine 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Vitamin B12 1e-06 g/l Metall salt sol. 44 Distilled water
culture temp
- @ref: 6228
- growth: positive
- type: growth
- temperature: 15
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 6228
- sample type: soil (0-4 cm, pH 6.3)
- geographic location: McMurdo Dry Valleys
- continent: Australia and Oceania
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_5606.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_90;96_2085;97_3319;98_4182;99_5606&stattab=map
- Last taxonomy: Deinococcus frigens subclade
- 16S sequence: AJ585982
- Sequence Identity:
- Total samples: 97
- soil counts: 30
- aquatic counts: 20
- animal counts: 46
- plant counts: 1
Safety information
risk assessment
- @ref: 6228
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 6228
- description: Deinococcus sp. AA829 16S rRNA gene, strain AA829
- accession: AJ585982
- length: 1495
- database: ena
- NCBI tax ID: 249403
GC content
- @ref: 6228
- GC-content: 61.8
External links
@ref: 6228
culture collection no.: DSM 15994, NRRL B-41044
straininfo link
- @ref: 73378
- straininfo: 215493
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 6228 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15994) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-15994 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 73378 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID215493.1 | StrainInfo: A central database for resolving microbial strain identifiers |