Strain identifier
BacDive ID: 3859
Type strain: 
Species: Deinococcus murrayi
Strain Designation: RSG-1.2
Strain history: <- M.S. da Costa <- A.C. Ferreira, RSG-1.2
NCBI tax ID(s): 68910 (species)
version 8.1 (current version)
General
@ref: 4291
BacDive-ID: 3859
DSM-Number: 11304
keywords: 16S sequence, Bacteria, thermophilic
description: Deinococcus murrayi RSG-1.2 is a thermophilic bacterium that was isolated from hot springs.
NCBI tax id
- NCBI tax id: 68910
- Matching level: species
strain history
- @ref: 4291
- history: <- M.S. da Costa <- A.C. Ferreira, RSG-1.2
doi: 10.13145/bacdive3859.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/deinococcota
- domain: Bacteria
- phylum: Deinococcota
- class: Deinococci
- order: Deinococcales
- family: Deinococcaceae
- genus: Deinococcus
- species: Deinococcus murrayi
- full scientific name: Deinococcus murrayi Ferreira et al. 1997
@ref: 4291
domain: Bacteria
phylum: Deinococcus-Thermus
class: Deinococci
order: Deinococcales
family: Deinococcaceae
genus: Deinococcus
species: Deinococcus murrayi
full scientific name: Deinococcus murrayi Ferreira et al. 1997
strain designation: RSG-1.2
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 4291 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 4291 | THERMUS 162 MEDIUM (DSMZ Medium 878) | yes | https://mediadive.dsmz.de/medium/878 | Name: THERMUS 162 MEDIUM (DSMZ Medium 878) Composition: Agar 28.0 g/l Na2HPO4 x 12 H2O 4.3 g/l Yeast extract 1.0 g/l Tryptone 1.0 g/l KH2PO4 0.544 g/l MgCl2 x 6 H2O 0.2 g/l Nitrilotriacetic acid 0.1 g/l CaSO4 x 2 H2O 0.04 g/l Fe(III) citrate 0.00122472 g/l MnSO4 x H2O 0.00114 g/l ZnSO4 x 7 H2O 0.00025 g/l H3BO3 0.00025 g/l CoCl2 x 6 H2O 2.25e-05 g/l CuSO4 x 5 H2O 1.25e-05 g/l Na2MoO4 x 2 H2O 1.25e-05 g/l H2SO4 Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 4291 | positive | growth | 40 | thermophilic |
| 4291 | positive | growth | 45-50 | thermophilic |
Isolation, sampling and environmental information
isolation
- @ref: 4291
- sample type: hot springs
- geographic location: Sâo Gemil
- country: Portugal
- origin.country: PRT
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Thermal spring |
| #Condition | #Thermophilic (>45°C) |
taxonmaps
- @ref: 69479
- File name: preview.99_1743.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15362;96_993;97_1156;98_1379;99_1743&stattab=map
- Last taxonomy: Deinococcus murrayi subclade
- 16S sequence: Y13042
- Sequence Identity:
- Total samples: 339
- soil counts: 15
- aquatic counts: 45
- animal counts: 262
- plant counts: 17
Safety information
risk assessment
- @ref: 4291
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 4291
- description: D.murrayi 16S rRNA gene, isolate RSG-1.2
- accession: Y13042
- length: 1472
- database: ena
- NCBI tax ID: 68910
External links
@ref: 4291
culture collection no.: DSM 11304
straininfo link
- @ref: 73369
- straininfo: 49074
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4291 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11304) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11304 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 73369 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49074.1 | StrainInfo: A central database for resolving microbial strain identifiers |