Strain identifier
BacDive ID: 3855
Type strain:
Species: Deinococcus geothermalis
Strain Designation: AG-3a
Strain history: CIP <- 1998, A.C. Ferreira, Coimbra Univ., Coimbra, Portugal: strain AG-3a
NCBI tax ID(s): 319795 (strain), 68909 (species)
General
@ref: 4287
BacDive-ID: 3855
DSM-Number: 11300
keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, thermophilic, Gram-positive, sphere-shaped
description: Deinococcus geothermalis AG-3a is an obligate aerobe, thermophilic, Gram-positive bacterium that was isolated from hot springs.
NCBI tax id
NCBI tax id | Matching level |
---|---|
68909 | species |
319795 | strain |
strain history
@ref | history |
---|---|
4287 | <- M.S. da Costa, AG-3a |
119604 | CIP <- 1998, A.C. Ferreira, Coimbra Univ., Coimbra, Portugal: strain AG-3a |
doi: 10.13145/bacdive3855.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/deinococcota
- domain: Bacteria
- phylum: Deinococcota
- class: Deinococci
- order: Deinococcales
- family: Deinococcaceae
- genus: Deinococcus
- species: Deinococcus geothermalis
- full scientific name: Deinococcus geothermalis Ferreira et al. 1997
@ref: 4287
domain: Bacteria
phylum: Deinococcus-Thermus
class: Deinococci
order: Deinococcales
family: Deinococcaceae
genus: Deinococcus
species: Deinococcus geothermalis
full scientific name: Deinococcus geothermalis Ferreira et al. 1997
strain designation: AG-3a
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell shape | motility | confidence |
---|---|---|---|---|---|
23350 | positive | 1.2-2.0 µm | sphere-shaped | no | |
69480 | positive | 98.957 | |||
119604 | positive | coccus-shaped | no |
colony morphology
@ref | colony size | colony color | incubation period | medium used |
---|---|---|---|---|
23350 | 0.2 mm | orange | 3 days | Degryse medium 162 |
119604 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
4287 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
4287 | THERMUS 162 MEDIUM (DSMZ Medium 878) | yes | https://mediadive.dsmz.de/medium/878 | Name: THERMUS 162 MEDIUM (DSMZ Medium 878) Composition: Agar 28.0 g/l Na2HPO4 x 12 H2O 4.3 g/l Yeast extract 1.0 g/l Tryptone 1.0 g/l KH2PO4 0.544 g/l MgCl2 x 6 H2O 0.2 g/l Nitrilotriacetic acid 0.1 g/l CaSO4 x 2 H2O 0.04 g/l Fe(III) citrate 0.00122472 g/l MnSO4 x H2O 0.00114 g/l ZnSO4 x 7 H2O 0.00025 g/l H3BO3 0.00025 g/l CoCl2 x 6 H2O 2.25e-05 g/l CuSO4 x 5 H2O 1.25e-05 g/l Na2MoO4 x 2 H2O 1.25e-05 g/l H2SO4 Distilled water |
32766 | MEDIUM 302 - for Deinococcus geothermalis | yes | Distilled water make up to (800.000 ml);Magnesium chloride hexahydrate (0.200 g);Nitrilotriacetic acid (0.100 g);Agar (28.000 g);Yeast extract (2.500 g);Ferric citrate (4.070 g);Tryptone (2.500 g);Calcium sulphate solution - M0551 (100.000 ml);Mineral sol | |
119604 | CIP Medium 302 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=302 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
4287 | positive | growth | 45 | thermophilic |
4287 | positive | growth | 45-50 | thermophilic |
23350 | positive | growth | 30-55 | |
23350 | positive | optimum | 47 | thermophilic |
32766 | positive | growth | 45 | thermophilic |
119604 | positive | growth | 30-45 | |
119604 | no | growth | 10 | psychrophilic |
119604 | no | growth | 25 | mesophilic |
culture pH
@ref | ability | type | pH |
---|---|---|---|
23350 | positive | optimum | 8.0 |
23350 | positive | optimum | 6.5 |
23350 | no | growth | 4.0 |
23350 | no | growth | 9.0 |
Physiology and metabolism
oxygen tolerance
- @ref: 119604
- oxygen tolerance: obligate aerobe
spore formation
@ref | spore formation | confidence |
---|---|---|
23350 | no | |
69481 | no | 90 |
69480 | no | 99.687 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
119604 | NaCl | positive | growth | 0-2 % |
119604 | NaCl | no | growth | 4 % |
119604 | NaCl | no | growth | 6 % |
119604 | NaCl | no | growth | 8 % |
119604 | NaCl | no | growth | 10 % |
murein
- @ref: 4287
- murein short key: A21.01
- type: A3ß L-Orn-Gly2-3
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
23350 | 16947 | citrate | - | assimilation |
23350 | 28053 | melibiose | - | assimilation |
23350 | 16634 | raffinose | - | assimilation |
23350 | 30849 | L-arabinose | - | assimilation |
23350 | 17268 | myo-inositol | - | assimilation |
23350 | 15963 | ribitol | - | assimilation |
23350 | 17632 | nitrate | - | reduction |
23350 | yeast extract | - | required for growth | |
23350 | 17057 | cellobiose | + | assimilation |
23350 | 15824 | D-fructose | + | assimilation |
23350 | 12936 | D-galactose | + | assimilation |
23350 | 17634 | D-glucose | + | assimilation |
23350 | 16899 | D-mannitol | + | assimilation |
23350 | 16024 | D-mannose | + | assimilation |
23350 | 17924 | D-sorbitol | + | assimilation |
23350 | 16551 | D-trehalose | + | assimilation |
23350 | 65327 | D-xylose | + | assimilation |
23350 | 17754 | glycerol | + | assimilation |
23350 | 17196 | L-asparagine | + | assimilation |
23350 | 29985 | L-glutamate | + | assimilation |
23350 | 18050 | L-glutamine | + | assimilation |
23350 | 17203 | L-proline | + | assimilation |
23350 | 62345 | L-rhamnose | + | assimilation |
23350 | 17115 | L-serine | + | assimilation |
23350 | 17716 | lactose | + | assimilation |
23350 | 25115 | malate | + | assimilation |
23350 | 17306 | maltose | + | assimilation |
23350 | 15361 | pyruvate | + | assimilation |
23350 | 30031 | succinate | + | assimilation |
23350 | 17992 | sucrose | + | assimilation |
23350 | 18305 | arbutin | + | degradation |
23350 | casein | + | degradation | |
23350 | 5291 | gelatin | + | degradation |
23350 | 606565 | hippurate | + | degradation |
23350 | 28017 | starch | + | degradation |
23350 | 16467 | L-arginine | assimilation | |
119604 | 606565 | hippurate | + | hydrolysis |
119604 | 17632 | nitrate | - | reduction |
119604 | 16301 | nitrite | - | reduction |
metabolite production
- @ref: 119604
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
---|---|---|---|---|
119604 | 15688 | acetoin | - | |
119604 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
23350 | alpha-galactosidase | + | 3.2.1.22 |
23350 | beta-galactosidase | + | 3.2.1.23 |
23350 | catalase | + | 1.11.1.6 |
23350 | cytochrome oxidase | + | 1.9.3.1 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | lipase (C 14) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
119604 | beta-galactosidase | - | 3.2.1.23 |
119604 | alcohol dehydrogenase | - | 1.1.1.1 |
119604 | gelatinase | +/- | |
119604 | amylase | + | |
119604 | DNase | - | |
119604 | caseinase | + | 3.4.21.50 |
119604 | catalase | + | 1.11.1.6 |
119604 | tween esterase | - | |
119604 | gamma-glutamyltransferase | - | 2.3.2.2 |
119604 | lecithinase | - | |
119604 | lipase | + | |
119604 | lysine decarboxylase | - | 4.1.1.18 |
119604 | ornithine decarboxylase | - | 4.1.1.17 |
119604 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
119604 | protease | - | |
119604 | tryptophan deaminase | - | |
119604 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
119604 | - | + | + | + | + | - | - | - | - | - | + | + | - | - | - | + | - | - | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
119604 | + | + | - | + | + | - | - | + | - | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | - | - | + | - | - | - | - | + | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | + | - | - | - | - | - | - | + | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | isolation date |
---|---|---|---|---|---|---|
4287 | hot springs | near Naples, Termi di Agnano | Italy | ITA | Europe | |
119604 | Environment, Hot spring | Naples | Italy | ITA | Europe | 1995 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Thermal spring |
#Condition | #Thermophilic (>45°C) |
taxonmaps
- @ref: 69479
- File name: preview.99_2804.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15362;96_1491;97_1779;98_2174;99_2804&stattab=map
- Last taxonomy: Deinococcus geothermalis subclade
- 16S sequence: Y13038
- Sequence Identity:
- Total samples: 3020
- soil counts: 339
- aquatic counts: 569
- animal counts: 1857
- plant counts: 255
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
4287 | 1 | Risk group (German classification) |
119604 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 4287
- description: D.geothermalis 16S rRNA gene, isolate AG-3aT
- accession: Y13038
- length: 1473
- database: ena
- NCBI tax ID: 319795
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Deinococcus geothermalis DSM 11300 | GCA_000196275 | complete | ncbi | 319795 |
66792 | Deinococcus geothermalis DSM 11300 | 319795.16 | complete | patric | 319795 |
66792 | Deinococcus geothermalis DSM 11300 | 319795.26 | plasmid | patric | 319795 |
66792 | Deinococcus geothermalis DSM 11300 | 319795.25 | plasmid | patric | 319795 |
66792 | Deinococcus geothermalis DSM 11300 | 641228488 | complete | img | 319795 |
GC content
- @ref: 23350
- GC-content: 65.9
- method: high performance liquid chromatography (HPLC)
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 90 | no |
motile | no | 91.896 | yes |
flagellated | no | 97.508 | yes |
gram-positive | yes | 79.537 | no |
anaerobic | no | 98.049 | no |
aerobic | yes | 89.613 | no |
halophile | no | 94.257 | no |
spore-forming | no | 93.326 | yes |
thermophile | yes | 88.54 | yes |
glucose-util | yes | 89.218 | yes |
glucose-ferment | no | 85.703 | no |
External links
@ref: 4287
culture collection no.: DSM 11300, CIP 105573
straininfo link
- @ref: 73365
- straininfo: 49070
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 9336890 | Deinococcus geothermalis sp. nov. and Deinococcus murrayi sp. nov., two extremely radiation-resistant and slightly thermophilic species from hot springs. | Ferreira AC, Nobre MF, Rainey FA, Silva MT, Wait R, Burghardt J, Chung AP, da Costa MS | Int J Syst Bacteriol | 10.1099/00207713-47-4-939 | 1997 | Base Composition, DNA, Bacterial/*analysis, Genes, Bacterial/genetics, Glucose/analysis, Gram-Positive Cocci/chemistry/*classification/*genetics/growth & development/ultrastructure, Hydrogen-Ion Concentration, Lipids/analysis, Microscopy, Electron, Molecular Sequence Data, *Phylogeny, RNA, Bacterial/*genetics, RNA, Ribosomal, 16S/*genetics, Radiation Tolerance, Temperature | Genetics |
Enzymology | 16980504 | Characterization of adhesion threads of Deinococcus geothermalis as type IV pili. | Saarimaa C, Peltola M, Raulio M, Neu TR, Salkinoja-Salonen MS, Neubauer P | J Bacteriol | 10.1128/JB.00608-06 | 2006 | Bacterial Adhesion, Bacterial Proteins/chemistry/isolation & purification, Deinococcus/chemistry/*physiology/ultrastructure, Electrophoresis, Polyacrylamide Gel, Fimbriae Proteins/chemistry/genetics, Fimbriae, Bacterial/chemistry/*ultrastructure, Glycoconjugates/analysis, Glycosylation, Metalloproteases/chemistry/genetics, Microscopy, Confocal, Microscopy, Electron, Plant Lectins/metabolism, Protein Binding, Ribosome Inactivating Proteins, Sequence Analysis, Protein, Sequence Homology, Amino Acid, Serine Endopeptidases/chemistry/genetics, Staining and Labeling | Transcriptome |
Metabolism | 19443548 | A novel carotenoid 1,2-hydratase (CruF) from two species of the non-photosynthetic bacterium Deinococcus. | Sun Z, Shen S, Wang C, Wang H, Hu Y, Jiao J, Ma T, Tian B, Hua Y | Microbiology (Reading) | 10.1099/mic.0.027623-0 | 2009 | Biosynthetic Pathways, Carotenoids/metabolism, DNA, Bacterial/analysis/genetics/metabolism, Deinococcus/*enzymology/genetics, Evolution, Molecular, Gene Deletion, Gene Expression, Genes, Bacterial, *Hydro-Lyases/genetics/metabolism, Phylogeny, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid | Phylogeny |
Phylogeny | 22012026 | Characterization of Deinococcus sahariens sp. nov., a radiation-resistant bacterium isolated from a Saharan hot spring. | Bouraoui H, Aissa MB, Abbassi F, Touzel JP, O'donohue M, Manai M | Arch Microbiol | 10.1007/s00203-011-0762-1 | 2011 | Base Composition, DNA, Bacterial/chemistry, Deinococcus/*classification/isolation & purification/*radiation effects, Fatty Acids/analysis, Hot Springs/*microbiology, Phylogeny, *Radiation Tolerance, Tunisia, Ultraviolet Rays | Enzymology |
Metabolism | 22112416 | Biosynthesis of (+)-catechin glycosides using recombinant amylosucrase from Deinococcus geothermalis DSM 11300. | Cho HK, Kim HH, Seo DH, Jung JH, Park JH, Baek NI, Kim MJ, Yoo SH, Cha J, Kim YR, Park CS | Enzyme Microb Technol | 10.1016/j.enzmictec.2011.05.007 | 2011 | Bacterial Proteins/genetics/metabolism, Catechin/*analogs & derivatives/biosynthesis/chemistry, Chromatography, High Pressure Liquid, Chromatography, Thin Layer, Deinococcus/*enzymology/genetics, Glucosyltransferases/genetics/*metabolism, Glycosides/*biosynthesis/chemistry, Glycosylation, Molecular Structure, Nuclear Magnetic Resonance, Biomolecular, Recombinant Proteins/genetics/metabolism, Sucrose/metabolism | Enzymology |
Metabolism | 25209745 | Experimental and statistical analysis of nutritional requirements for the growth of the extremophile Deinococcus geothermalis DSM 11300. | Bornot J, Aceves-Lara CA, Molina-Jouve C, Uribelarrea JL, Gorret N | Extremophiles | 10.1007/s00792-014-0671-8 | 2014 | Biomass, Culture Media/*chemistry, Deinococcus/*growth & development/metabolism, Fermentation, Glucose/metabolism, Hot Temperature, Industrial Microbiology/*methods, Oxygen/metabolism | Stress |
Genetics | 28775794 | High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460. | Matrosova VY, Gaidamakova EK, Makarova KS, Grichenko O, Klimenkova P, Volpe RP, Tkavc R, Ertem G, Conze IH, Brambilla E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Daligault H, Davenport K, Erkkila T, Goodwin LA, Gu W, Munk C, Teshima H, Xu Y, Chain P, Woolbert M, Gunde-Cimerman N, Wolf YI, Grebenc T, Gostincar C, Daly MJ | Stand Genomic Sci | 10.1186/s40793-017-0258-y | 2017 | ||
Enzymology | 30369110 | Sustainable Production of Dihydroxybenzene Glucosides Using Immobilized Amylosucrase from Deinococcus geothermalis. | Lee HS, Kim TS, Parajuli P, Pandey RP, Sohng JK | J Microbiol Biotechnol | 10.4014/jmb.1805.05054 | 2018 | Bacterial Proteins/genetics/*metabolism, Deinococcus/*enzymology/genetics, Enzymes, Immobilized/genetics/*metabolism, Escherichia coli/enzymology/genetics/metabolism, Glucosides/analysis/*biosynthesis/chemistry, Glucosyltransferases/genetics/*metabolism, Glycosides/analysis/biosynthesis/chemistry, Glycosylation, Hydrogen-Ion Concentration, Industrial Microbiology/*methods, Phenols/analysis/chemistry, Recombinant Proteins/genetics/isolation & purification/metabolism, Substrate Specificity, Sucrose/metabolism, Temperature | Metabolism |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
4287 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11300) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11300 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
23350 | Ana Cristina Ferreira, M. Fernanda Nobre, Fred A. Rainey, Manuel T. Silva, Robin Wait, Jutta Burghardt, Ana Paula Chung, Milton S. Da Costa | 10.1099/00207713-47-4-939 | Deinococcus geothermalis sp. nov. and Deinococcus murrayi sp. nov., Two Extremely Radiation-Resistant and Slightly Thermophilic Species from Hot Springs | IJSEM 47: 939-947 1997 | 9336890 | |
32766 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/17607 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
73365 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49070.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
119604 | Curators of the CIP | Collection of Institut Pasteur (CIP 105573) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105573 |