Strain identifier
BacDive ID: 3849
Type strain: 
Species: Deinococcus grandis
Strain Designation: KS 0488
Strain history: H. Oyaizu KS 0488.
NCBI tax ID(s): 57498 (species)
version 8.1 (current version)
General
@ref: 1534
BacDive-ID: 3849
DSM-Number: 3965
keywords: Bacteria, mesophilic
description: Deinococcus grandis KS 0488 is a mesophilic bacterium that was isolated from skin of Cyprinus carpio.
NCBI tax id
- NCBI tax id: 57498
- Matching level: species
strain history
| @ref | history |
|---|---|
| 1534 | <- E. Stackebrandt <- H. Oyaizu, KS 0488 |
| 67770 | H. Oyaizu KS 0488. |
doi: 10.13145/bacdive3849.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/deinococcota
- domain: Bacteria
- phylum: Deinococcota
- class: Deinococci
- order: Deinococcales
- family: Deinococcaceae
- genus: Deinococcus
- species: Deinococcus grandis
- full scientific name: Deinococcus grandis (Oyaizu et al. 1987) Rainey et al. 1997
synonyms
- @ref: 20215
- synonym: Deinobacter grandis
@ref: 1534
domain: Bacteria
phylum: Deinococcus-Thermus
class: Deinococci
order: Deinococcales
family: Deinococcaceae
genus: Deinococcus
species: Deinococcus grandis
full scientific name: Deinococcus grandis (Oyaizu et al. 1987) Rainey et al. 1997
strain designation: KS 0488
type strain: no
Culture and growth conditions
culture medium
- @ref: 1534
- name: PYEA MEDIUM (DSMZ Medium 364)
- growth: yes
- link: https://mediadive.dsmz.de/medium/364
- composition: Name: PYEA MEDIUM (DSMZ Medium 364) Composition: Agar 15.0 g/l Yeast extract 10.0 g/l Peptone 10.0 g/l NaCl 5.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 1534 | positive | growth | 26 | mesophilic |
| 67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
murein
- @ref: 1534
- murein short key: A21.01
- type: A3ß L-Orn-Gly2-3
observation
- @ref: 67770
- observation: quinones: MK-8
Isolation, sampling and environmental information
isolation
| @ref | sample type | host species |
|---|---|---|
| 1534 | skin of Cyprinus carpio | Cyprinus carpio |
| 67770 | Skin of Cyprinus carpio | Cyprinus carpio |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Fishes | |
| #Host Body-Site | #Organ | #Skin, Nail, Hair |
Safety information
risk assessment
- @ref: 1534
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 1534
- GC-content: 68.4
External links
@ref: 1534
culture collection no.: DSM 3965, IAM 13007, JCM 6271
straininfo link
- @ref: 73359
- straininfo: 265333
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 1534 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3965) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-3965 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 73359 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID265333.1 | StrainInfo: A central database for resolving microbial strain identifiers |