Strain identifier
BacDive ID: 382
Type strain:
Species: Bordetella petrii
Strain Designation: Se-1111R
Strain history: CIP <- 2001, CCUG <- F. von Wintzingerode, Techn. Univ. Berlin, Germany: strain Se-1111R
NCBI tax ID(s): 340100 (strain), 94624 (species)
General
@ref: 4829
BacDive-ID: 382
DSM-Number: 12804
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, rod-shaped, human pathogen
description: Bordetella petrii Se-1111R is an aerobe, mesophilic, Gram-negative human pathogen that was isolated from bioreactor culture enriched from river sediment.
NCBI tax id
NCBI tax id | Matching level |
---|---|
340100 | strain |
94624 | species |
strain history
@ref | history |
---|---|
4829 | <- F. von Wintzingerode, Techn. Univ. Berlin; Se-1111R |
121788 | CIP <- 2001, CCUG <- F. von Wintzingerode, Techn. Univ. Berlin, Germany: strain Se-1111R |
doi: 10.13145/bacdive382.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Bordetella
- species: Bordetella petrii
- full scientific name: Bordetella petrii Von Wintzingerode et al. 2001
@ref: 4829
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Bordetella
species: Bordetella petrii
full scientific name: Bordetella petrii von Wintzingerode et al. 2001
strain designation: Se-1111R
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell width | cell shape | motility | confidence |
---|---|---|---|---|---|---|
23282 | negative | 1.0-2.8 µm | 0.4-0.7 µm | rod-shaped | no | |
69480 | negative | 99.981 | ||||
121788 | negative | rod-shaped | no |
colony morphology
@ref | incubation period | hemolysis ability |
---|---|---|
4829 | 1-2 days | |
121788 | 1 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
4829 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
4829 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
4829 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1.pdf | |
23282 | MacConkey agar | yes | ||
33725 | MEDIUM 6 - Columbia agar with 10 % horse blood | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |
121788 | CIP Medium 6 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
4829 | positive | growth | 30 | mesophilic |
23282 | positive | growth | 37 | mesophilic |
23282 | positive | growth | 30 | mesophilic |
33725 | positive | growth | 37 | mesophilic |
55867 | positive | growth | 37 | mesophilic |
4829 | positive | growth | 37 | mesophilic |
121788 | positive | growth | 25-45 | |
121788 | no | growth | 5 | psychrophilic |
121788 | no | growth | 15 | psychrophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
23282 | aerobe |
23282 | anaerobe |
55867 | aerobe |
121788 | obligate aerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
23282 | no | |
69481 | no | 100 |
69480 | no | 99.974 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
121788 | NaCl | positive | growth | 2-4 % |
121788 | NaCl | no | growth | 0 % |
121788 | NaCl | no | growth | 6 % |
121788 | NaCl | no | growth | 8 % |
121788 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
23282 | 22599 | arabinose | - | anaerobic growth |
23282 | 17057 | cellobiose | - | anaerobic growth |
23282 | 17234 | glucose | - | anaerobic growth |
23282 | 17754 | glycerol | - | anaerobic growth |
23282 | 17716 | lactose | - | anaerobic growth |
23282 | 17306 | maltose | - | anaerobic growth |
23282 | 29864 | mannitol | - | anaerobic growth |
23282 | 37684 | mannose | - | anaerobic growth |
23282 | 6731 | melezitose | - | anaerobic growth |
23282 | 17992 | sucrose | - | anaerobic growth |
23282 | 17814 | salicin | - | anaerobic growth |
23282 | 27082 | trehalose | - | anaerobic growth |
23282 | 18222 | xylose | - | anaerobic growth |
23282 | 15963 | ribitol | - | assimilation |
23282 | 27613 | amygdalin | - | assimilation |
23282 | 18305 | arbutin | - | assimilation |
23282 | 27689 | decanoate | - | assimilation |
23282 | 17057 | cellobiose | - | assimilation |
23282 | 17108 | D-arabinose | - | assimilation |
23282 | 17634 | D-glucose | - | assimilation |
23282 | 65327 | D-xylose | - | assimilation |
23282 | 17113 | erythritol | - | assimilation |
23282 | 28066 | gentiobiose | - | assimilation |
23282 | 17754 | glycerol | - | assimilation |
23282 | 28087 | glycogen | - | assimilation |
23282 | 17268 | myo-inositol | - | assimilation |
23282 | 15443 | inulin | - | assimilation |
23282 | 30849 | L-arabinose | - | assimilation |
23282 | 65328 | L-xylose | - | assimilation |
23282 | 17716 | lactose | - | assimilation |
23282 | 17306 | maltose | - | assimilation |
23282 | 29864 | mannitol | - | assimilation |
23282 | 37684 | mannose | - | assimilation |
23282 | 6731 | melezitose | - | assimilation |
23282 | 28053 | melibiose | - | assimilation |
23282 | 320061 | methyl alpha-D-glucopyranoside | - | assimilation |
23282 | 74863 | methyl beta-D-xylopyranoside | - | assimilation |
23282 | 506227 | N-acetylglucosamine | - | assimilation |
23282 | 18401 | phenylacetate | - | assimilation |
23282 | 16634 | raffinose | - | assimilation |
23282 | 26546 | rhamnose | - | assimilation |
23282 | 33942 | ribose | - | assimilation |
23282 | 17992 | sucrose | - | assimilation |
23282 | 17814 | salicin | - | assimilation |
23282 | 30911 | sorbitol | - | assimilation |
23282 | 28017 | starch | - | assimilation |
23282 | 27082 | trehalose | - | assimilation |
23282 | 17151 | xylitol | - | assimilation |
23282 | 4853 | esculin | - | hydrolysis |
23282 | 5291 | gelatin | - | hydrolysis |
23282 | 17128 | adipate | + | assimilation |
23282 | 16947 | citrate | + | assimilation |
23282 | 8391 | D-gluconate | + | assimilation |
23282 | 15589 | L-malate | + | assimilation |
23282 | 17632 | nitrate | + | degradation |
23282 | 78021 | tetrazolium | + | reduction |
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | + | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | - | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
121788 | 16947 | citrate | + | carbon source |
121788 | 4853 | esculin | - | hydrolysis |
121788 | 606565 | hippurate | + | hydrolysis |
121788 | 17632 | nitrate | + | builds gas from |
121788 | 17632 | nitrate | + | reduction |
121788 | 16301 | nitrite | + | builds gas from |
121788 | 16301 | nitrite | + | reduction |
121788 | 15792 | malonate | - | assimilation |
121788 | 17632 | nitrate | + | respiration |
antibiotic resistance
- @ref: 121788
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
23282 | 16301 | nitrite | no |
23282 | 35581 | indole | no |
23282 | 15688 | acetoin | no |
68369 | 35581 | indole | no |
121788 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | - | ||
121788 | 15688 | acetoin | - | ||
121788 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
4829 | catalase | + | 1.11.1.6 |
4829 | cytochrome-c oxidase | + | 1.9.3.1 |
23282 | catalase | + | 1.11.1.6 |
23282 | cytochrome oxidase | + | 1.9.3.1 |
23282 | urease | - | 3.5.1.5 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
121788 | oxidase | + | |
121788 | beta-galactosidase | - | 3.2.1.23 |
121788 | alcohol dehydrogenase | - | 1.1.1.1 |
121788 | gelatinase | - | |
121788 | amylase | - | |
121788 | DNase | - | |
121788 | caseinase | - | 3.4.21.50 |
121788 | catalase | + | 1.11.1.6 |
121788 | tween esterase | - | |
121788 | gamma-glutamyltransferase | + | 2.3.2.2 |
121788 | lecithinase | - | |
121788 | lipase | - | |
121788 | lysine decarboxylase | - | 4.1.1.18 |
121788 | ornithine decarboxylase | - | 4.1.1.17 |
121788 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
121788 | tryptophan deaminase | - | |
121788 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121788 | - | + | + | + | - | + | - | - | - | - | + | + | - | - | - | + | - | - | - | - |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4829 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | + | + | - | |
4829 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | +/- | + | + | + | - | |
4829 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | +/- | + | + | + | +/- | + |
4829 | + | - | - | - | - | - | - | - | - | - | - | +/- | - | - | + | - | + | + | + | - | + |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121788 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | + | + | + | + | - | + | + | - | - | - | - | - | - | + | - | + | - | - | + | - | + | - | - | - | - | - | - | - | + | - | - | - | + | + | + | + | - | - | - | + | + | + | + | + | + | + | + | + | - | + | + | + |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | sampling date | isolation date |
---|---|---|---|---|---|---|---|
4829 | bioreactor culture enriched from river sediment | Jena, Saale | Germany | DEU | Europe | ||
55867 | River sediment derived anaerobic bioreactor | Saale near Jena | Germany | DEU | Europe | 1998 | |
121788 | Environment, River sediment derived anaerobic bioreactor | Sweden | SWE | Europe | 1996 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Bioreactor | |
#Environmental | #Aquatic | #River (Creek) |
#Environmental | #Aquatic | #Sediment |
Safety information
risk assessment
@ref | pathogenicity human | biosafety level | biosafety level comment |
---|---|---|---|
4829 | yes, in single cases | 1 | Risk group (German classification) |
121788 | 2 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 20218
- description: Bordetella petrii 16S rRNA gene, strain DSM 12804
- accession: AJ249861
- length: 1496
- database: ena
- NCBI tax ID: 94624
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Bordetella petrii DSM 12804 | GCA_000067205 | complete | ncbi | 94624 |
66792 | Bordetella petrii DSM 12804 | 340100.3 | complete | patric | 340100 |
66792 | Bordetella petrii DSM 12804 | 641228479 | complete | img | 340100 |
GC content
@ref | GC-content | method |
---|---|---|
4829 | 63.8 | |
23282 | 63.8 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
gram-positive | no | 98.088 | yes |
anaerobic | no | 98.604 | no |
halophile | no | 87.179 | no |
spore-forming | no | 94.618 | yes |
glucose-util | no | 77.736 | yes |
motile | yes | 85.235 | yes |
flagellated | no | 66.267 | yes |
thermophile | no | 99.16 | yes |
aerobic | yes | 85.112 | no |
glucose-ferment | no | 91.872 | yes |
External links
@ref: 4829
culture collection no.: DSM 12804, CCUG 43448, CIP 107267, ATCC BAA 461, CCM 7166
straininfo link
- @ref: 70062
- straininfo: 49365
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 11491321 | Bordetella petrii sp. nov., isolated from an anaerobic bioreactor, and emended description of the genus Bordetella. | von Wintzingerode F, Schattke A, Siddiqui RA, Rosick U, Gobel UB, Gross R | Int J Syst Evol Microbiol | 10.1099/00207713-51-4-1257 | 2001 | Anaerobiosis, Base Composition, Base Sequence, Bioreactors, Bordetella/*classification/genetics/*isolation & purification/metabolism, Chlorobenzenes/metabolism, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/genetics, Genes, Bacterial, Geologic Sediments/microbiology, Microscopy, Electron, Molecular Sequence Data, Open Reading Frames, Phylogeny, Selenic Acid, Selenium Compounds/metabolism, Terminology as Topic | Metabolism |
Pathogenicity | 19390985 | New mobile genetic elements in Cupriavidus metallidurans CH34, their possible roles and occurrence in other bacteria. | Van Houdt R, Monchy S, Leys N, Mergeay M | Antonie Van Leeuwenhoek | 10.1007/s10482-009-9345-4 | 2009 | Betaproteobacteria/drug effects/*genetics, Bordetella/genetics, Burkholderia/genetics, Chemoautotrophic Growth, Cupriavidus/drug effects/*genetics/metabolism, *DNA Transposable Elements, Delftia/genetics, Drug Resistance, Bacterial, Gene Expression Regulation, Bacterial, Genomic Islands, *Genomics, Integrases, Metals, Heavy/pharmacology, Recombinases, Synteny, Tyrosine | Genetics |
Metabolism | 26897378 | Successful expression of the Bordetella petrii nitrile hydratase activator P14K and the unnecessary role of Ser115. | Sun W, Zhu L, Chen X, Chen P, Yang L, Ding W, Zhou Z, Liu Y | BMC Biotechnol | 10.1186/s12896-016-0252-2 | 2016 | Bacterial Proteins/chemistry/genetics/*metabolism, Bordetella/*enzymology/genetics, Enzyme Stability, Escherichia coli/genetics, Hydro-Lyases/chemistry/genetics/*metabolism, Models, Molecular, Recombinant Fusion Proteins/chemistry/genetics/*metabolism, Serine/*genetics | Enzymology |
Enzymology | 27075457 | Activity Enhancement Based on the Chemical Equilibrium of Multiple-Subunit Nitrile Hydratase from Bordetella petrii. | Liu Y, Liu P, Lin L, Zhao Y, Zhong W, Wu L, Zhou Z, Sun W | Appl Biochem Biotechnol | 10.1007/s12010-016-2079-7 | 2016 | Bacterial Proteins/metabolism, Bordetella/*enzymology, Chromatography, Affinity, Electrophoresis, Polyacrylamide Gel, Hydro-Lyases/isolation & purification/*metabolism, Kinetics, Models, Biological, Plasmids/metabolism, Protein Subunits/*metabolism, Recombinant Proteins/isolation & purification/metabolism | Metabolism |
Phylogeny | 27902262 | Saccharedens versatilis gen. nov., sp. nov., a sugar-degrading member of the Burkholderiales isolated from Cephalotes rohweri ant guts. | Lin JY, Hobson WJ, Wertz JT | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001650 | 2017 | Alcaligenaceae/*classification/genetics/isolation & purification, Animals, Ants/*microbiology, Arizona, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Symbiosis, Ubiquinone/chemistry | Transcriptome |
Pathogenicity | 28154518 | Drug Target Identification and Elucidation of Natural Inhibitors for Bordetella petrii: An In Silico Study. | Rath SN, Ray M, Pattnaik A, Pradhan SK | Genomics Inform | 10.5808/GI.2016.14.4.241 | 2016 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
4829 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12804) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-12804 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
23282 | F von Wintzingerode, A Schattke, R A Siddiqui, U Rösick, U B Göbel, R Gross | 10.1099/00207713-51-4-1257 | Bordetella petrii sp. nov., isolated from an anaerobic bioreactor, and emended description of the genus Bordetella. | IJSEM 51: 1257-1265 2001 | 11491321 | |
33725 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/4684 | ||||
55867 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 43448) | https://www.ccug.se/strain?id=43448 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
68369 | Automatically annotated from API 20NE | |||||
68382 | Automatically annotated from API zym | |||||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
70062 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49365.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
121788 | Curators of the CIP | Collection of Institut Pasteur (CIP 107267) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107267 |