Strain identifier
BacDive ID: 307
Type strain: 
Species: Achromobacter xylosoxidans subsp. xylosoxidans
Strain history: <- CCUG <- I. Adlerberth
NCBI tax ID(s): 85698 (species)
version 8.1 (current version)
General
@ref: 18161
BacDive-ID: 307
DSM-Number: 26102
keywords: Bacteria, aerobe, mesophilic
description: Achromobacter xylosoxidans subsp. xylosoxidans DSM 26102 is an aerobe, mesophilic bacterium that was isolated from human sputum, 34-year old cystic fibrosis patient, female.
NCBI tax id
- NCBI tax id: 85698
- Matching level: species
strain history
- @ref: 18161
- history: <- CCUG <- I. Adlerberth
doi: 10.13145/bacdive307.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Achromobacter
- species: Achromobacter xylosoxidans subsp. xylosoxidans
- full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (Yabuuchi and Yano 1981 ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998
synonyms
- @ref: 20215
- synonym: Alcaligenes xylosoxidans subsp. xylosoxidans
@ref: 18161
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Achromobacter
species: Achromobacter xylosoxidans subsp. xylosoxidans
full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998
type strain: no
Morphology
colony morphology
- @ref: 18161
- type of hemolysis: gamma
- incubation period: 1-2 days
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 18161 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 18161 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 18161 | positive | growth | 37 | mesophilic |
| 18161 | positive | growth | 30 | mesophilic |
| 61036 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 61036
- oxygen tolerance: aerobe
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 18161 | catalase | + | 1.11.1.6 |
| 18161 | cytochrome-c oxidase | + | 1.9.3.1 |
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18161 | + | - | - | - | - | - | - | - | + | - | +/- | - | - | - | + | + | + | + | + | + | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | sampling date |
|---|---|---|---|---|---|---|
| 18161 | human sputum, 34-year old cystic fibrosis patient, female | Göteborg | Sweden | SWE | Europe | |
| 61036 | Human sputum,34-yr-old woman,cystic fibrosis | Göteborg | Sweden | SWE | Europe | 2008-06-11 |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Disease | #Cystic fibrosis |
| #Infection | #Patient | |
| #Host | #Human | #Female |
| #Host Body Product | #Fluids | #Sputum |
Safety information
risk assessment
- @ref: 18161
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 18161
culture collection no.: DSM 26102, CCUG 56600
straininfo link
- @ref: 69989
- straininfo: 402860
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18161 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26102) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26102 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 61036 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 56600) | https://www.ccug.se/strain?id=56600 | |
| 68369 | Automatically annotated from API 20NE | |||
| 69989 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID402860.1 | StrainInfo: A central database for resolving microbial strain identifiers |