Strain identifier
BacDive ID: 299
Type strain: 
Species: Achromobacter xylosoxidans
Strain Designation: T7
Strain history: <- F. Streichsbier (Pseudomonas sp. T7)
NCBI tax ID(s): 85698 (species)
version 8.1 (current version)
General
@ref: 4511
BacDive-ID: 299
DSM-Number: 11852
keywords: genome sequence, Bacteria, mesophilic
description: Achromobacter xylosoxidans T7 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 85698
- Matching level: species
strain history
- @ref: 4511
- history: <- F. Streichsbier (Pseudomonas sp. T7)
doi: 10.13145/bacdive299.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Achromobacter
- species: Achromobacter xylosoxidans
- full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981
synonyms
@ref synonym 20215 Achromobacter xylosoxidans 20215 Alcaligenes xylosoxidans 20215 Alcaligenes xylosoxydans 20215 Alcaligenes denitrificans subsp. xylosoxydans
@ref: 4511
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Achromobacter
species: Achromobacter xylosoxidans
full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981 emend. Yabuuchi et al. 1998
strain designation: T7
type strain: no
Culture and growth conditions
culture medium
- @ref: 4511
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 4511
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4511 | + | - | - | - | - | - | - | - | +/- | +/- | - | - | - | - | + | + | + | + | + | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 4511
- sample type: soil
- country: Austria
- origin.country: AUT
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 4511
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Achromobacter pestifer strain FDAARGOS_790
- accession: 1353889.4
- assembly level: complete
- database: patric
- NCBI tax ID: 1353889
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 85.037 | no |
| gram-positive | no | 97.942 | no |
| anaerobic | no | 98.882 | no |
| halophile | no | 88.048 | no |
| spore-forming | no | 94.443 | no |
| thermophile | no | 99.725 | yes |
| glucose-util | no | 62.1 | no |
| flagellated | no | 61.66 | no |
| aerobic | yes | 88.433 | no |
| glucose-ferment | no | 90.548 | yes |
External links
@ref: 4511
culture collection no.: DSM 11852
straininfo link
- @ref: 69981
- straininfo: 49190
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4511 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11852) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11852 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 68369 | Automatically annotated from API 20NE | |||
| 69981 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49190.1 | StrainInfo: A central database for resolving microbial strain identifiers |