Strain identifier
BacDive ID: 297
Type strain:
Species: Achromobacter xylosoxidans
Strain Designation: KM543
Strain history: CIP <- 1971, E. Yabuuchi, Osaka, Japan: strain KM 543, Achromobacter xylosoxidans
NCBI tax ID(s): 85698 (species)
General
@ref: 1075
BacDive-ID: 297
DSM-Number: 2402
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, motile
description: Achromobacter xylosoxidans KM543 is an aerobe, mesophilic, motile bacterium that was isolated from ear discharge.
NCBI tax id
- NCBI tax id: 85698
- Matching level: species
strain history
@ref | history |
---|---|
36489 | 1971, E. Yabuuchi, Osaka, Japan: strain KM 543, Achromobacter xylosoxidans |
1075 | <- ATCC <- Eiko Yabuuchi, KM543 (Achromobacter xylosoxidans) |
67770 | R. Hugh 2838. |
124002 | CIP <- 1971, E. Yabuuchi, Osaka, Japan: strain KM 543, Achromobacter xylosoxidans |
doi: 10.13145/bacdive297.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Achromobacter
- species: Achromobacter xylosoxidans
- full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981
synonyms
@ref synonym 20215 Achromobacter xylosoxidans 20215 Alcaligenes xylosoxidans 20215 Alcaligenes xylosoxydans 20215 Alcaligenes denitrificans subsp. xylosoxydans
@ref: 1075
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Achromobacter
species: Achromobacter xylosoxidans subsp. xylosoxidans
full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998
strain designation: KM543
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | yes | 97.462 | ||
69480 | 99.998 | negative | ||
124002 | yes | negative | rod-shaped |
colony morphology
@ref | incubation period |
---|---|
1075 | 1-2 days |
124002 |
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
36489 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
1075 | NUTRIENT AGAR (DSMZ Medium 1) | yes | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | https://mediadive.dsmz.de/medium/1 |
124002 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
36489 | positive | growth | 30 | mesophilic |
1075 | positive | growth | 30 | mesophilic |
60956 | positive | growth | 37 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
124002 | positive | growth | 15-41 | |
124002 | no | growth | 5 | psychrophilic |
124002 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
60956 | aerobe |
124002 | obligate aerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 96 |
69480 | no | 99.859 |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | + | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | + | reduction |
68368 | 17632 | nitrate | + | reduction |
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 17992 | sucrose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | - | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | + | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
124002 | 16947 | citrate | + | carbon source |
124002 | 4853 | esculin | - | hydrolysis |
124002 | 606565 | hippurate | + | hydrolysis |
124002 | 17632 | nitrate | + | builds gas from |
124002 | 17632 | nitrate | + | reduction |
124002 | 16301 | nitrite | + | builds gas from |
124002 | 16301 | nitrite | + | reduction |
124002 | 35020 | tributyrin | - | hydrolysis |
124002 | 15792 | malonate | - | assimilation |
124002 | 17632 | nitrate | + | respiration |
antibiotic resistance
- @ref: 124002
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | no |
68368 | 16301 | nitrite | yes |
68368 | 15688 | acetoin | yes |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
124002 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | - | ||
68368 | 15688 | acetoin | + | ||
68368 | 35581 | indole | - | ||
124002 | 15688 | acetoin | - | ||
124002 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
1075 | catalase | + | 1.11.1.6 |
1075 | cytochrome-c oxidase | + | 1.9.3.1 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | + | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
68368 | cytochrome oxidase | - | 1.9.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
124002 | oxidase | + | |
124002 | beta-galactosidase | - | 3.2.1.23 |
124002 | alcohol dehydrogenase | - | 1.1.1.1 |
124002 | gelatinase | - | |
124002 | amylase | - | |
124002 | DNase | - | |
124002 | caseinase | - | 3.4.21.50 |
124002 | catalase | + | 1.11.1.6 |
124002 | tween esterase | - | |
124002 | gamma-glutamyltransferase | - | 2.3.2.2 |
124002 | lecithinase | - | |
124002 | lipase | - | |
124002 | lysine decarboxylase | - | 4.1.1.18 |
124002 | ornithine decarboxylase | - | 4.1.1.17 |
124002 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
124002 | tryptophan deaminase | - | |
124002 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
124002 | - | - | + | + | - | + | - | - | - | + | + | - | - | - | - | - | - | - | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | NO2 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1075 | - | - | - | - | + | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | + |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1075 | + | - | - | - | - | - | - | - | + | - | +/- | - | - | - | + | + | + | + | + | + | + |
1075 | + | - | - | - | - | - | - | - | + | - | - | - | - | - | + | + | + | + | + | + |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
124002 | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | + | + | + | + | + | + | + | + | - | - | - | - | - | - | + | + | - | - | - | + | - | - | - | - | - | - | - | + | - | + | + | - | - | + | + | + | + | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | + |
Isolation, sampling and environmental information
isolation
@ref | sample type | sampling date | geographic location | country | origin.country | continent | isolation date |
---|---|---|---|---|---|---|---|
1075 | ear discharge | ||||||
60956 | Human ear | 1969 | Osaka | Japan | JPN | Asia | |
67770 | Ear discharge | ||||||
124002 | Ear discharge | Osaka | Japan | JPN | Asia | 1969 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host Body-Site | #Organ | #Ear |
#Host Body Product | #Fluids |
taxonmaps
- @ref: 69479
- File name: preview.99_710.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_7;96_9;97_9;98_570;99_710&stattab=map
- Last taxonomy: Achromobacter
- 16S sequence: Y14908
- Sequence Identity:
- Total samples: 1520
- soil counts: 273
- aquatic counts: 362
- animal counts: 742
- plant counts: 143
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
1075 | 2 | Risk group (German classification) |
124002 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
1075 | Achromobacter xylosoxidans 16S rRNA gene, type strain DSM 10346 | Y14908 | 1495 | ena | 85698 |
67770 | Achromobacter xylosoxidans gene for 16S ribosomal RNA | D88005 | 1462 | ena | 85698 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Achromobacter xylosoxidans NCTC10807 | GCA_001457475 | complete | ncbi | 85698 |
66792 | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | GCA_000508285 | complete | ncbi | 1216976 |
66792 | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | 1216976.8 | wgs | patric | 1216976 |
66792 | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | 1216976.3 | complete | patric | 1216976 |
66792 | Achromobacter xylosoxidans strain FDAARGOS_789 | 85698.244 | complete | patric | 85698 |
66792 | Achromobacter xylosoxidans strain NCTC10807 | 85698.28 | complete | patric | 85698 |
66792 | Achromobacter xylosoxidans NCTC10807 | 2667527485 | complete | img | 85698 |
66792 | Achromobacter xylosoxidans NBRC 15126, ATCC 27061 | 2558309085 | complete | img | 1216976 |
66792 | Achromobacter xylosoxidans NBRC 15126, ATCC 27061 | 2731957707 | draft | img | 1216976 |
67770 | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | GCA_001598595 | contig | ncbi | 1216976 |
67770 | Achromobacter xylosoxidans genome assembly NCTC10807, chromosome : 1 | LN831029 | ncbi | 85698 |
GC content
@ref | GC-content | method |
---|---|---|
1075 | 69.2 | |
67770 | 57.6 | thermal denaturation, midpoint method (Tm) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 96 | no |
flagellated | no | 65.377 | no |
gram-positive | no | 98.25 | no |
anaerobic | no | 98.726 | yes |
aerobic | yes | 88.836 | no |
halophile | no | 90.813 | no |
spore-forming | no | 93.149 | no |
glucose-util | yes | 56.314 | yes |
motile | yes | 84.702 | no |
thermophile | no | 99.676 | yes |
glucose-ferment | no | 91.957 | yes |
External links
@ref: 1075
culture collection no.: DSM 2402, ATCC 27061, DSM 10346, NRRL 84082, CCUG 56438, CIP 71.32, NCTC 10807, LMG 1863, CCM 2741, IFO 15126, NCIMB 12033, JCM 9659, CCUG 12689, CECT 467, CECT 927, IAM 12684, NBRC 15126, NRRL B-4082, NCIB 12033
straininfo link
- @ref: 69979
- straininfo: 389299
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Pathogenicity | 6699141 | Nosocomial colonization and infection by Achromobacter xylosoxidans. | Reverdy ME, Freney J, Fleurette J, Coulet M, Surgot M, Marmet D, Ploton C | J Clin Microbiol | 10.1128/jcm.19.2.140-143.1984 | 1984 | Alcaligenes/*classification/drug effects/metabolism, Anti-Bacterial Agents/pharmacology, Bacterial Infections/*microbiology, Cross Infection/*microbiology, Humans, Male, Microbial Sensitivity Tests, Middle Aged | Phylogeny |
Phylogeny | 9688077 | Emendation of genus Achromobacter and Achromobacter xylosoxidans (Yabuuchi and Yano) and proposal of Achromobacter ruhlandii (Packer and Vishniac) comb. nov., Achromobacter piechaudii (Kiredjian et al.) comb. nov., and Achromobacter xylosoxidans subsp. denitrificans (Ruger and Tan) comb. nov. | Yabuuchi E, Kawamura Y, Kosako Y, Ezaki T | Microbiol Immunol | 10.1111/j.1348-0421.1998.tb02306.x | 1998 | Alcaligenes/*classification/genetics, Bacterial Typing Techniques, Bordetella/classification, DNA, Bacterial/analysis/chemistry, Humans, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Terminology as Topic | Pathogenicity |
Enzymology | 14965775 | Cytoplasmic expression of the Achromobacter xylosoxidans blue copper nitrite reductase in Escherichia coli and characterisation of the recombinant protein. | Ho WH, Ooi BL, Jorgensen AM, Borg L, Jespersen LL, Christensen HE | Protein Expr Purif | 10.1016/j.pep.2003.08.010 | 2003 | Achromobacter denitrificans/*enzymology/genetics, Cytoplasm/enzymology, Electron Spin Resonance Spectroscopy, Escherichia coli/*enzymology/genetics, Nitrite Reductases/*biosynthesis/*chemistry/genetics/isolation & purification, Recombinant Proteins/biosynthesis/genetics/isolation & purification, Spectrometry, Mass, Electrospray Ionization/methods, Spectrophotometry, Ultraviolet | Phylogeny |
Phylogeny | 19671719 | Parapusillimonas granuli gen. nov., sp. nov., isolated from granules from a wastewater-treatment bioreactor. | Kim YJ, Kim MK, Im WT, Srinivasan S, Yang DC | Int J Syst Evol Microbiol | 10.1099/ijs.0.009720-0 | 2009 | Alcaligenaceae/classification/*genetics/isolation & purification, Base Sequence, Carboxylic Acids/metabolism, Cell Size, DNA, Bacterial/genetics, Enzymes/metabolism, Glucose/metabolism, Molecular Sequence Data, Phylogeny, Quinones/metabolism, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics | Metabolism |
Pathogenicity | 25487802 | Genomic insights into intrinsic and acquired drug resistance mechanisms in Achromobacter xylosoxidans. | Hu Y, Zhu Y, Ma Y, Liu F, Lu N, Yang X, Luan C, Yi Y, Zhu B | Antimicrob Agents Chemother | 10.1128/AAC.04260-14 | 2014 | Achromobacter denitrificans/*drug effects/*genetics, Anti-Bacterial Agents/*pharmacology, Drug Resistance, Multiple, Bacterial/*genetics, Genome, Bacterial | Genetics |
Phylogeny | 27902206 | Achromobacter aloeverae sp. nov., isolated from the root of Aloe vera (L.) Burm.f. | Kuncharoen N, Muramatsu Y, Shibata C, Kamakura Y, Nakagawa Y, Tanasupawat S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001566 | 2017 | Achromobacter/*classification/genetics/isolation & purification, Aloe/*microbiology, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, *Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Thailand, Ubiquinone/chemistry | Transcriptome |
Phylogeny | 28975472 | Sulfur oxidation by Achromobacter xylosoxidans strain wsp05 reveals ecological widening over which thiotrophs are distributed. | Jadhav K, Jadhav I | World J Microbiol Biotechnol | 10.1007/s11274-017-2359-6 | 2017 | Achromobacter denitrificans/*classification/genetics/isolation & purification, Environmental Microbiology, Genes, rRNA, Hydrogen-Ion Concentration, Oxidation-Reduction, Phylogeny, RNA, Ribosomal, 16S/genetics, Sulfites/chemistry, Sulfur/*chemistry, Temperature, Thiosulfates/chemistry | Enzymology |
Phylogeny | 33033853 | Achromobacter aestuarii sp. nov., Isolated from an Estuary. | Kim SC, Chung SO, Lee HJ | Curr Microbiol | 10.1007/s00284-020-02231-9 | 2020 | *Achromobacter, Bacterial Typing Techniques, DNA, Bacterial/genetics, *Estuaries, Fatty Acids/analysis, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA | Transcriptome |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
1075 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2402) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2402 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
36489 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10603 | ||
60956 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 56438) | https://www.ccug.se/strain?id=56438 | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
68368 | Automatically annotated from API 20E | |||
68369 | Automatically annotated from API 20NE | |||
68382 | Automatically annotated from API zym | |||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |
69979 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID389299.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
124002 | Curators of the CIP | Collection of Institut Pasteur (CIP 71.32) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2071.32 |