Strain identifier

BacDive ID: 285

Type strain: Yes

Species: Aeromonas taiwanensis

Strain Designation: A2-50

Strain history: CIP <- 2010, CECT <- M. J. Figuera, Rovira i Virgili Univ., Reus, Spain: strain A2-50

NCBI tax ID(s): 633417 (species)

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General

@ref: 17489

BacDive-ID: 285

DSM-Number: 24096

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped, colony-forming, human pathogen

description: Aeromonas taiwanensis A2-50 is a facultative anaerobe, mesophilic, Gram-negative human pathogen that forms circular colonies and was isolated from wounds of a heavily burned 40-years-old man.

NCBI tax id

  • NCBI tax id: 633417
  • Matching level: species

strain history

@refhistory
17489<- M. J. Figueras, Rovira i Virgili University, Reus, Spain; A2-50
123420CIP <- 2010, CECT <- M. J. Figuera, Rovira i Virgili Univ., Reus, Spain: strain A2-50

doi: 10.13145/bacdive285.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas taiwanensis
  • full scientific name: Aeromonas taiwanensis Alperi et al. 2010

@ref: 17489

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas taiwanensis

full scientific name: Aeromonas taiwanensis Alperi et al. 2010

strain designation: A2-50

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotility
23262negative1.8-2.5 µm0.8-1 µmrod-shapedyes
123420negativerod-shapedyes

colony morphology

  • @ref: 23262
  • type of hemolysis: beta
  • hemolysis ability: 1
  • colony size: 2-5 mm
  • colony color: beige, opaque
  • colony shape: circular
  • incubation period: 2 days
  • medium used: TSA

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
17489TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
23262MacConkey agaryes
23262Trypticase Soy Agar (TSA)yes
38267MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
123420CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
17489positivegrowth28mesophilic
23262positivegrowth36mesophilic
23262nogrowth4psychrophilic
23262nogrowth40thermophilic
23262positiveoptimum30mesophilic
38267positivegrowth30mesophilic

culture pH

@refabilitytypepHPH range
23262positiveoptimum8.5-9.5alkaliphile
23262nogrowth4.5

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
23262facultative anaerobe
123420facultative anaerobe

spore formation

  • @ref: 23262
  • spore formation: no

halophily

  • @ref: 23262
  • salt: NaCl
  • growth: no
  • tested relation: maximum
  • concentration: 6 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2326217057cellobiose-builds acid from
2326215963ribitol-builds acid from
2326217108D-arabinose-builds acid from
2326218333D-arabitol-builds acid from
2326228847D-fucose-builds acid from
2326262318D-lyxose-builds acid from
2326216024D-mannose-builds acid from
2326216443D-tagatose-builds acid from
2326265327D-xylose-builds acid from
2326217113erythritol-builds acid from
2326228066gentiobiose-builds acid from
2326215443inulin-builds acid from
2326218403L-arabitol-builds acid from
2326218287L-fucose-builds acid from
2326262345L-rhamnose-builds acid from
2326217266L-sorbose-builds acid from
2326265328L-xylose-builds acid from
2326217716lactose-builds acid from
232626731melezitose-builds acid from
2326228053melibiose-builds acid from
23262320061methyl alpha-D-glucopyranoside-builds acid from
2326243943methyl alpha-D-mannoside-builds acid from
2326274863methyl beta-D-xylopyranoside-builds acid from
2326217268myo-inositol-builds acid from
2326232528turanose-builds acid from
2326217151xylitol-builds acid from
2326217234glucose-builds gas from
23262168082-dehydro-D-gluconate-carbon source
23262174265-dehydro-D-gluconate-carbon source
2326217128adipate-carbon source
2326216947citrate-carbon source
2326216024D-mannose-carbon source
2326218401phenylacetate-carbon source
23262168082-dehydro-D-gluconate-energy source
23262174265-dehydro-D-gluconate-energy source
2326217128adipate-energy source
2326216947citrate-energy source
2326216024D-mannose-energy source
2326218401phenylacetate-energy source
232624767elastin-hydrolysis
2326216199urea-hydrolysis
2326227613amygdalin+builds acid from
2326215824D-fructose+builds acid from
2326212936D-galactose+builds acid from
2326217634D-glucose+builds acid from
2326216899D-mannitol+builds acid from
2326216988D-ribose+builds acid from
2326217754glycerol+builds acid from
2326230849L-arabinose+builds acid from
2326217306maltose+builds acid from
23262506227N-acetylglucosamine+builds acid from
2326216634raffinose+builds acid from
2326217814salicin+builds acid from
2326217992sucrose+builds acid from
2326227082trehalose+builds acid from
2326216947citrate+carbon source
2326227689decanoate+carbon source
2326217634D-glucose+carbon source
2326216899D-mannitol+carbon source
2326224265gluconate+carbon source
2326228087glycogen+carbon source
2326230849L-arabinose+carbon source
2326225115malate+carbon source
2326217306maltose+carbon source
23262506227N-acetylglucosamine+carbon source
2326227689decanoate+energy source
2326217634D-glucose+energy source
2326216899D-mannitol+energy source
2326224265gluconate+energy source
2326228087glycogen+energy source
2326230849L-arabinose+energy source
2326225115malate+energy source
2326217306maltose+energy source
23262506227N-acetylglucosamine+energy source
2326227897tryptophan+energy source
2326218305arbutin+hydrolysis
2326216991dna+hydrolysis
232624853esculin+hydrolysis
232625291gelatin+hydrolysis
2326216828L-tryptophan+hydrolysis
2326228017starch+hydrolysis
2326228938ammonium+nitrogen source
2326217632nitrate+reduction
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate+builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen+builds acid from
6837128017starch+builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose-builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose-builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose+builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol+builds acid from
12342017632nitrate+reduction
12342016301nitrite+reduction

antibiotic resistance

@refChEBImetaboliteis antibioticis resistantgroup IDis intermediateis sensitive
232622676amoxicillinyesyes
232622676amoxicillinyesyes11
232623542cephalothinyesyes
2326248923erythromycinyesyes
232629587ticarcillinyesyes
232629587ticarcillinyesyes18
2326273908vibriostatyesyes
2326217076streptomycinyesyes
232622637amikacinyesyes
23262161680aztreonamyesyes
23262478164cefepimeyesyes
232623493cefoperazoneyesyes
23262209807cefoxitinyesyes
232623508ceftazidimeyesyes
2326229007ceftriaxoneyesyes
23262204928cefotaximeyesyes
2326217698chloramphenicolyesyes
23262100241ciprofloxacinyesyes
2326228915fosfomycinyesyes
2326217833gentamicinyesyes
23262471744imipenemyesyes
232626104kanamycinyesyes
23262100147nalidixic acidyesyes
232628232piperacillinyesyes
232628232piperacillinyes16yes
2326227902tetracyclineyesyes
2326228864tobramycinyesyes
2326245924trimethoprimyesyes
2326248947clavulanic acidyesyes11
2326248947clavulanic acidyesyes18
232629421tazobactamyes16yes

metabolite production

@refChebi-IDmetaboliteproduction
2326216136hydrogen sulfideno
2326215688acetoinno
2326235581indoleyes
12342035581indoleyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole testcitrate test
2326215688acetoin-
2326235581indole+
2326216947citrate+

enzymes

@refvalueactivityec
23262arginine dihydrolase+3.5.3.6
23262beta-galactosidase+3.2.1.23
23262catalase+1.11.1.6
23262cytochrome oxidase+1.9.3.1
23262lysine decarboxylase-4.1.1.18
23262ornithine decarboxylase-4.1.1.17
23262tryptophan deaminase+4.1.99.1
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase+3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)+
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
123420oxidase+
123420catalase-1.11.1.6
123420urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
123420-++++++++-++-++-++--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
123420+--++----+++-----+---+-+++-+--++---++---------+--

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentgeographic locationisolation date
17489wounds of a heavily burned 40-years-old manSpainESPEurope
123420Human, Wound cultureTaiwanTWNAsiaTainan2000

isolation source categories

Cat1Cat2Cat3
#Infection#Patient
#Host Body-Site#Other#Wound
#Host#Human#Male

taxonmaps

  • @ref: 69479
  • File name: preview.99_19.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_19&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: FJ230077
  • Sequence Identity:
  • Total samples: 1087
  • soil counts: 45
  • aquatic counts: 400
  • animal counts: 595
  • plant counts: 47

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
17489yes, in single cases1Risk group (German classification)
1234201Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Aeromonas taiwanensis strain LMG 24683 16S ribosomal RNA gene, partial sequenceJX014450151ena633417
17489Aeromonas taiwanensis strain A2-50 16S ribosomal RNA gene, partial sequenceFJ2300771503ena633417

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aeromonas taiwanensis LMG 24683GCA_000820165scaffoldncbi633417
66792Aeromonas taiwanensis LMG 24683GCA_000699185contigncbi633417
66792Aeromonas taiwanensis strain LMG 24683633417.3wgspatric633417
66792Aeromonas taiwanensis strain LMG 24683633417.4wgspatric633417
66792Aeromonas taiwanensis LMG 246832585427983draftimg633417
66792Aeromonas taiwanensis LMG 246832651869660draftimg633417

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileyes90.524no
flagellatedyes91.733no
gram-positiveno98.959yes
anaerobicno98.212no
aerobicyes92.551no
halophileno94.418no
spore-formingno95.514no
glucose-utilyes90.247no
thermophileno99.651no
glucose-fermentyes87.327no

External links

@ref: 17489

culture collection no.: DSM 24096, CECT 7403, LMG 24683, CIP 110204

straininfo link

  • @ref: 69967
  • straininfo: 356287

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny19819994Aeromonas taiwanensis sp. nov. and Aeromonas sanarellii sp. nov., clinical species from Taiwan.Alperi A, Martinez-Murcia AJ, Ko WC, Monera A, Saavedra MJ, Figueras MJInt J Syst Evol Microbiol10.1099/ijs.0.014621-02009Aeromonas/*classification/genetics/*isolation & purification, Aged, Bacterial Proteins/genetics, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Female, Gram-Negative Bacterial Infections/*microbiology, Humans, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, TaiwanPathogenicity
Genetics24926060Genome Sequence of Aeromonas taiwanensis LMG 24683T, a Clinical Wound Isolate from Taiwan.Wang HC, Ko WC, Shu HY, Chen PL, Wang YC, Wu CJGenome Announc10.1128/genomeA.00579-142014

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
17489Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24096)https://www.dsmz.de/collection/catalogue/details/culture/DSM-24096
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
23262Anabel Alperi, Antonio J. Martínez-Murcia, Wen-Chien Ko, Arturo Monera, Maria J. Saavedra, Maria J. Figueras10.1099/ijs.0.014621-0Aeromonas taiwanensis sp. nov. and Aeromonas sanarellii sp. nov., clinical species from TaiwanIJSEM 60: 2048-2055 201019819994
38267Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/8038
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69967Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID356287.1StrainInfo: A central database for resolving microbial strain identifiers
123420Curators of the CIPCollection of Institut Pasteur (CIP 110204)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110204