Strain identifier

BacDive ID: 284

Type strain: Yes

Species: Aeromonas diversa

Strain history: CIP <- 2014, CECT <- 1991, A. Martinez-Murica, Alicante Univ., Alicante, Spain <- ATCC <- FW. Hickman-Brenner <- Louisiana State Hlth Dept., Louisiana, USA <- Charity Hosp., New-Orleans, Louisiana, USA: strain CDC 2478-85

NCBI tax ID(s): 1268237 (strain), 502790 (species)

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General

@ref: 17981

BacDive-ID: 284

DSM-Number: 25288

keywords: genome sequence, 16S sequence, Bacteria, mesophilic, motile

description: Aeromonas diversa DSM 25288 is a mesophilic, motile bacterium that was isolated from human wound at tibia.

NCBI tax id

NCBI tax idMatching level
1268237strain
502790species

strain history

@refhistory
17981<- CECT <- A. J. Martinez-Murcia <- ATCC <- F. W. Hickman-Brenner, CDC <- Lousiana State Health Department <- Charity Hospital, New Orleans, USA
118952CIP <- 2014, CECT <- 1991, A. Martinez-Murica, Alicante Univ., Alicante, Spain <- ATCC <- FW. Hickman-Brenner <- Louisiana State Hlth Dept., Louisiana, USA <- Charity Hosp., New-Orleans, Louisiana, USA: strain CDC 2478-85

doi: 10.13145/bacdive284.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas diversa
  • full scientific name: Aeromonas diversa Miñana-Galbis et al. 2010

@ref: 17981

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas diversa

full scientific name: Aeromonas diversa Miñana-Galbis et al. 2010

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480yes97.346
6948099.991negative
118952yesrod-shaped

multimedia

  • @ref: 17981
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_25288.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
17981TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
36545TCS-Biorad-Tubesyes
118952CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
17981positivegrowth37mesophilic
36545positivegrowth37mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.876

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
17981human wound at tibiaNew Orleans, Louisiana, Charity HospitalUSAUSANorth America
118952Human, Leg woundLouisianaUnited States of AmericaUSANorth America

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Wound
#Host Body-Site#Limb#Leg

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
179812Risk group (German classification)
1189521Risk group (French classification)

Sequence information

16S sequences

  • @ref: 17981
  • description: Aeromonas diversa CDC 2478-85 strain CECT 4254 16S ribosomal RNA gene, partial sequence
  • accession: GQ365710
  • length: 1504
  • database: ena
  • NCBI tax ID: 1268237

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aeromonas diversa CDC 2478-85 CECT 4254GCA_000819805scaffoldncbi1268237
66792Aeromonas diversa CECT 4254502790.3wgspatric502790
66792Aeromonas diversa 2478-85, CECT 42542534681677draftimg1268237

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileyes89.256no
flagellatedyes90.762no
gram-positiveno98.835no
anaerobicno96.203no
aerobicyes82.259no
halophileno86.637no
spore-formingno95.021no
glucose-utilyes88.188no
thermophileno98.32no
glucose-fermentyes86.527no

External links

@ref: 17981

culture collection no.: DSM 25288, ATCC 43946, CCM 7325, CECT 4254, CIP 110816, LMG 17321, CDC 2478-85

straininfo link

  • @ref: 69966
  • straininfo: 9072

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny20005654Proposal to assign Aeromonas diversa sp. nov. as a novel species designation for Aeromonas group 501.Minana-Galbis D, Farfan M, Gaspar Loren J, Carmen Fuste MSyst Appl Microbiol10.1016/j.syapm.2009.11.0022009Aeromonas/*classification/genetics/metabolism, Bacterial Proteins/genetics, Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence HomologyGenetics
Genetics23792745Draft Genome Sequence of the Aeromonas diversa Type Strain.Farfan M, Spataro N, Sanglas A, Albarral V, Loren JG, Bosch E, Fuste MCGenome Announc10.1128/genomeA.00330-132013

Reference

@idauthorscataloguedoi/urltitle
17981Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25288)https://www.dsmz.de/collection/catalogue/details/culture/DSM-25288
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
36545Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/30629
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
69966Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID9072.1StrainInfo: A central database for resolving microbial strain identifiers
118952Curators of the CIPCollection of Institut Pasteur (CIP 110816)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110816