General

@ref: 2508

BacDive-ID: 2764

DSM-Number: 6159

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Acetivibrio aldrichii P-1 is an anaerobe, mesophilic bacterium that was isolated from wood-fermenting anaerobic digestor.

NCBI tax id

• NCBI tax id: 29353
• Matching level: species

strain history

• @ref: 2508
• history: <- D. R. Boone, OGC; OCM 112 <- J. C. Yang; P-1 {1986}

doi: 10.13145/bacdive2764.20230509.8

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Eubacteriales
• family: Oscillospiraceae
• genus: Acetivibrio
• species: Acetivibrio aldrichii
• full scientific name: Acetivibrio aldrichii (Yang et al. 1990) Tindall 2019

• synonyms

  @ref	synonym
  20215	Clostridium aldrichii
  20215	Hungateiclostridium aldrichii

@ref: 2508

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Oscillospiraceae

genus: Acetivibrio

species: Acetivibrio aldrichii

full scientific name: Acetivibrio aldrichii (Yang et al. 1990) Tindall 2019

strain designation: P-1

type strain: yes

Culture and growth conditions

culture medium

• @ref: 2508
• name: RUMINOCLOSTRIDIUM CELLULOLYTICUM (CM3) MEDIUM (DSMZ Medium 520)
• growth: yes
• link: https://mediadive.dsmz.de/medium/520
• composition: Name: RUMINOCLOSTRIDIUM CELLULOLYTICUM (CM3) MEDIUM (DSMZ Medium 520) Composition: Cellulose 9.97009 g/l (optional) Cellobiose 5.98205 g/l K2HPO4 x 3 H2O 2.89133 g/l Yeast extract 1.99402 g/l Na2CO3 1.49551 g/l KH2PO4 1.49551 g/l (NH4)2SO4 1.29611 g/l L-Cysteine HCl x H2O 0.498504 g/l MgCl2 x 6 H2O 0.199402 g/l CaCl2 x 2 H2O 0.0747757 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l FeSO4 x 7 H2O 0.00124626 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water

culture temp

• @ref: 2508
• growth: positive
• type: growth
• temperature: 35
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 2508
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 2508
• sample type: wood-fermenting anaerobic digestor
• country: USA
• origin.country: USA
• continent: North America

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_177274.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_196;96_1788;97_2140;98_2621;99_177274&stattab=map
• Last taxonomy: Acetivibrio aldrichii
• 16S sequence: X71846
• Sequence Identity:
• Total samples: 55
• soil counts: 9
• aquatic counts: 30
• animal counts: 8
• plant counts: 8

Safety information

risk assessment

• @ref: 2508
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 2508
• description: C.aldrichii gene for 16S ribosomal RNA
• accession: X71846
• length: 1508
• database: ena
• NCBI tax ID: 29353

GC content

• @ref: 2508
• GC-content: 40.0

External links

@ref: 2508

culture collection no.: DSM 6159, ATCC 49358, OCM 112

straininfo link

literature

• topic: Phylogeny
• Pubmed-ID: 2397194
• title: Clostridium aldrichii sp. nov., a cellulolytic mesophile inhabiting a wood-fermenting anaerobic digester.
• authors: Yang JC, Chynoweth DP, Williams DS, Li A
• journal: Int J Syst Bacteriol
• DOI: 10.1099/00207713-40-3-268
• year: 1990
• mesh: Bacteria, Anaerobic/classification/isolation & purification/metabolism/ultrastructure, Base Composition, Biodegradation, Environmental, Clostridium/classification/*isolation & purification/metabolism/ultrastructure, DNA, Bacterial/analysis, Fermentation
• topic2: Enzymology

Reference