Strain identifier

BacDive ID: 2679

Type strain: No

Species: Clostridium sp.

Strain Designation: 1a

Strain history: <- VKM <- V.I. Duda, 1a ("Clostridium favososporum")

NCBI tax ID(s): 1506 (species)

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General

@ref: 2356

BacDive-ID: 2679

DSM-Number: 5907

keywords: Bacteria, anaerobe, mesophilic

description: Clostridium sp. 1a is an anaerobe, mesophilic bacterium that was isolated from rice soil.

NCBI tax id

  • NCBI tax id: 1506
  • Matching level: species

strain history

  • @ref: 2356
  • history: <- VKM <- V.I. Duda, 1a ("Clostridium favososporum")

doi: 10.13145/bacdive2679.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium sp.
  • full scientific name: Clostridium Prazmowski 1880 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Anaerobacter
    20215Inflabilis
    20215Tyzzerella
    20215Pseudoclostridium
    20215Lachnoclostridium

@ref: 2356

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridiaceae

genus: Clostridium

species: Clostridium sp.

full scientific name: Clostridium sp.

strain designation: 1a

type strain: no

Culture and growth conditions

culture medium

  • @ref: 2356
  • name: CLOSTRIDIUM (GV) MEDIUM (DSMZ Medium 500)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/500
  • composition: Name: CLOSTRIDIUM (GV) MEDIUM (DSMZ Medium 500) Composition: D-Glucose 4.97512 g/l NaHCO3 2.98507 g/l NaCl 2.23881 g/l Yeast extract 0.995025 g/l NH4Cl 0.497512 g/l MgSO4 x 7 H2O 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l Sodium resazurin 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l MnCl2 x 4 H2O 9.95025e-05 g/l Pyridoxine hydrochloride 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Folic acid 1.99005e-05 g/l Biotin 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water

culture temp

  • @ref: 2356
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

oxygen tolerance

  • @ref: 2356
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 2356
  • sample type: rice soil
  • geographic location: Kuban
  • country: Russia
  • origin.country: RUS
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)

External links

@ref: 2356

culture collection no.: DSM 5907, BKM B-1360, VKM B-1360

straininfo link

  • @ref: 72207
  • straininfo: 48027

Reference

@idauthorscataloguedoi/urltitle
2356Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5907)https://www.dsmz.de/collection/catalogue/details/culture/DSM-5907
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
72207Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48027.1StrainInfo: A central database for resolving microbial strain identifiers