Strain identifier

BacDive ID: 2656

Type strain: Yes

Species: Clostridium felsineum

Strain Designation: 653

Strain history: <- ATCC; ATCC 17797 (Clostridium roseum) <- L. S. McClung; 653 <- F. W. Andrewes {1930}

NCBI tax ID(s): 36839 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 2996

BacDive-ID: 2656

DSM-Number: 7320

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic

description: Clostridium felsineum 653 is an anaerobe, mesophilic bacterium that was isolated from german maize.

NCBI tax id

  • NCBI tax id: 36839
  • Matching level: species

strain history

  • @ref: 2996
  • history: <- ATCC; ATCC 17797 (Clostridium roseum) <- L. S. McClung; 653 <- F. W. Andrewes {1930}

doi: 10.13145/bacdive2656.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium felsineum
  • full scientific name: Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Bacillus felsineus
    20215Clostridium aurantibutyricum
    20215Clostridium roseum

@ref: 2996

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridiaceae

genus: Clostridium

species: Clostridium roseum

full scientific name: Clostridium roseum (ex McCoy and McClung 1935) Cato et al. 1988

strain designation: 653

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 2996
  • name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/104c
  • composition: Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

culture temp

  • @ref: 2996
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 2996
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 2996
  • sample type: german maize

isolation source categories

  • Cat1: #Host
  • Cat2: #Plants
  • Cat3: #Herbaceous plants (Grass,Crops)

Safety information

risk assessment

  • @ref: 2996
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 2996
  • description: Clostridium roseum 16S rRNA gene, partial, strain DSM 7320
  • accession: Y18170
  • length: 1420
  • database: ena
  • NCBI tax ID: 84029

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Clostridium felsineum DSM 7320GCA_002006215completencbi36839
66792Clostridium roseum strain DSM 732084029.9wgspatric84029
66792Clostridium roseum DSM 73202687453704draftimg84029

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileyes77.47no
flagellatedyes64.86no
gram-positiveyes82.739no
anaerobicyes97.023yes
halophileno95.535no
spore-formingyes96.989no
thermophileno99.193yes
glucose-utilyes90.339no
aerobicno96.931yes
glucose-fermentyes67.006no

External links

@ref: 2996

culture collection no.: DSM 7320, ATCC 17797

Reference

@idauthorscataloguedoi/urltitle
2996Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7320)https://www.dsmz.de/collection/catalogue/details/culture/DSM-7320
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)