Strain identifier
BacDive ID: 2656
Type strain:
Species: Clostridium felsineum
Strain Designation: 653
Strain history: <- ATCC; ATCC 17797 (Clostridium roseum) <- L. S. McClung; 653 <- F. W. Andrewes {1930}
NCBI tax ID(s): 36839 (species)
General
@ref: 2996
BacDive-ID: 2656
DSM-Number: 7320
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic
description: Clostridium felsineum 653 is an anaerobe, mesophilic bacterium that was isolated from german maize.
NCBI tax id
- NCBI tax id: 36839
- Matching level: species
strain history
- @ref: 2996
- history: <- ATCC; ATCC 17797 (Clostridium roseum) <- L. S. McClung; 653 <- F. W. Andrewes {1930}
doi: 10.13145/bacdive2656.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium felsineum
- full scientific name: Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus felsineus 20215 Clostridium aurantibutyricum 20215 Clostridium roseum
@ref: 2996
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium roseum
full scientific name: Clostridium roseum (ex McCoy and McClung 1935) Cato et al. 1988
strain designation: 653
type strain: yes
Culture and growth conditions
culture medium
- @ref: 2996
- name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104c
- composition: Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
culture temp
- @ref: 2996
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 2996
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 2996
- sample type: german maize
isolation source categories
- Cat1: #Host
- Cat2: #Plants
- Cat3: #Herbaceous plants (Grass,Crops)
Safety information
risk assessment
- @ref: 2996
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 2996
- description: Clostridium roseum 16S rRNA gene, partial, strain DSM 7320
- accession: Y18170
- length: 1420
- database: ena
- NCBI tax ID: 84029
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Clostridium felsineum DSM 7320 | GCA_002006215 | complete | ncbi | 36839 |
66792 | Clostridium roseum strain DSM 7320 | 84029.9 | wgs | patric | 84029 |
66792 | Clostridium roseum DSM 7320 | 2687453704 | draft | img | 84029 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | yes | 77.47 | no |
flagellated | yes | 64.86 | no |
gram-positive | yes | 82.739 | no |
anaerobic | yes | 97.023 | yes |
halophile | no | 95.535 | no |
spore-forming | yes | 96.989 | no |
thermophile | no | 99.193 | yes |
glucose-util | yes | 90.339 | no |
aerobic | no | 96.931 | yes |
glucose-ferment | yes | 67.006 | no |
External links
@ref: 2996
culture collection no.: DSM 7320, ATCC 17797
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
2996 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7320) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-7320 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |