Strain identifier
BacDive ID: 2654
Type strain:
Species: Fusobacterium mortiferum
Strain history: ATCC 25751 <-- L. DS. Smith VPI 2488 <-- H. Beerens PCL.
NCBI tax ID(s): 850 (species)
General
@ref: 626
BacDive-ID: 2654
DSM-Number: 1295
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic
description: Fusobacterium mortiferum DSM 1295 is an anaerobe, mesophilic bacterium of the family Fusobacteriaceae.
NCBI tax id
- NCBI tax id: 850
- Matching level: species
strain history
@ref | history |
---|---|
626 | <- ATCC <- L.DS. Smith, VPI 2488 <- H. Beerens, PCL |
67770 | ATCC 25751 <-- L. DS. Smith VPI 2488 <-- H. Beerens PCL. |
doi: 10.13145/bacdive2654.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/fusobacteriota
- domain: Bacteria
- phylum: Fusobacteriota
- class: Fusobacteriia
- order: Fusobacteriales
- family: Fusobacteriaceae
- genus: Fusobacterium
- species: Fusobacterium mortiferum
- full scientific name: Fusobacterium mortiferum (Harris 1901) Moore and Holdeman 1970 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus mortiferus 20215 Hiblerillus rectus 20215 Clostridium rectum
@ref: 626
domain: Bacteria
phylum: Fusobacteria
class: Fusobacteriia
order: Clostridiales
family: Fusobacteriaceae
genus: Fusobacterium
species: Fusobacterium mortiferum
full scientific name: Fusobacterium mortiferum (Harris 1901) Moore and Holdeman 1970 emend. De Witte et al. 2017
type strain: no
Culture and growth conditions
culture medium
- @ref: 626
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
626 | positive | growth | 37 | mesophilic |
67770 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 626
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_7123.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_140;96_3341;97_4098;98_5240;99_7123&stattab=map
- Last taxonomy: Fusobacterium mortiferum
- 16S sequence: LC053839
- Sequence Identity:
- Total samples: 32499
- soil counts: 447
- aquatic counts: 2288
- animal counts: 29675
- plant counts: 89
Safety information
risk assessment
- @ref: 626
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
626 | Clostridium rectum 16S rRNA gene, strain NCIMB 10651 | X77850 | 1511 | ena | 850 |
67770 | [Clostridium] rectum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1412 | LC053839 | 1469 | ena | 850 |
Genome sequences
- @ref: 66792
- description: Clostridium rectum DSM 1295
- accession: 2928356456
- assembly level: draft
- database: img
- NCBI tax ID: 1485
GC content
@ref | GC-content | method |
---|---|---|
626 | 26.0 | |
67770 | 26 | thermal denaturation, midpoint method (Tm) |
External links
@ref: 626
culture collection no.: DSM 1295, ATCC 25751, NCIB 10651, VPI 2488, JCM 1412, BCRC 14525, NCIMB 10651
straininfo link
- @ref: 72184
- straininfo: 92211
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
626 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1295) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1295 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
72184 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID92211.1 | StrainInfo: A central database for resolving microbial strain identifiers |