Strain identifier

BacDive ID: 2654

Type strain: No

Species: Fusobacterium mortiferum

Strain history: ATCC 25751 <-- L. DS. Smith VPI 2488 <-- H. Beerens PCL.

NCBI tax ID(s): 850 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 626

BacDive-ID: 2654

DSM-Number: 1295

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic

description: Fusobacterium mortiferum DSM 1295 is an anaerobe, mesophilic bacterium of the family Fusobacteriaceae.

NCBI tax id

  • NCBI tax id: 850
  • Matching level: species

strain history

@refhistory
626<- ATCC <- L.DS. Smith, VPI 2488 <- H. Beerens, PCL
67770ATCC 25751 <-- L. DS. Smith VPI 2488 <-- H. Beerens PCL.

doi: 10.13145/bacdive2654.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/fusobacteriota
  • domain: Bacteria
  • phylum: Fusobacteriota
  • class: Fusobacteriia
  • order: Fusobacteriales
  • family: Fusobacteriaceae
  • genus: Fusobacterium
  • species: Fusobacterium mortiferum
  • full scientific name: Fusobacterium mortiferum (Harris 1901) Moore and Holdeman 1970 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Bacillus mortiferus
    20215Hiblerillus rectus
    20215Clostridium rectum

@ref: 626

domain: Bacteria

phylum: Fusobacteria

class: Fusobacteriia

order: Clostridiales

family: Fusobacteriaceae

genus: Fusobacterium

species: Fusobacterium mortiferum

full scientific name: Fusobacterium mortiferum (Harris 1901) Moore and Holdeman 1970 emend. De Witte et al. 2017

type strain: no

Culture and growth conditions

culture medium

  • @ref: 626
  • name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/110
  • composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water

culture temp

@refgrowthtypetemperaturerange
626positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 626
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_7123.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_140;96_3341;97_4098;98_5240;99_7123&stattab=map
  • Last taxonomy: Fusobacterium mortiferum
  • 16S sequence: LC053839
  • Sequence Identity:
  • Total samples: 32499
  • soil counts: 447
  • aquatic counts: 2288
  • animal counts: 29675
  • plant counts: 89

Safety information

risk assessment

  • @ref: 626
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
626Clostridium rectum 16S rRNA gene, strain NCIMB 10651X778501511ena850
67770[Clostridium] rectum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1412LC0538391469ena850

Genome sequences

  • @ref: 66792
  • description: Clostridium rectum DSM 1295
  • accession: 2928356456
  • assembly level: draft
  • database: img
  • NCBI tax ID: 1485

GC content

@refGC-contentmethod
62626.0
6777026thermal denaturation, midpoint method (Tm)

External links

@ref: 626

culture collection no.: DSM 1295, ATCC 25751, NCIB 10651, VPI 2488, JCM 1412, BCRC 14525, NCIMB 10651

straininfo link

  • @ref: 72184
  • straininfo: 92211

Reference

@idauthorscataloguedoi/urltitle
626Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1295)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1295
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
72184Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92211.1StrainInfo: A central database for resolving microbial strain identifiers