Strain identifier

BacDive ID: 262

Type strain: Yes

Species: Aeromonas molluscorum

Strain Designation: 848T, 848

Strain history: CIP <- 2005, CECT <- 2004, D. Minana-Galbis, Barcelona Univ., Barcelona, Spain: strain 848

NCBI tax ID(s): 271417 (species)

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General

@ref: 6752

BacDive-ID: 262

DSM-Number: 17090

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped, colony-forming, pigmented

description: Aeromonas molluscorum 848T is a facultative anaerobe, mesophilic, Gram-negative bacterium that forms circular colonies and has a brown pigmentation.

NCBI tax id

  • NCBI tax id: 271417
  • Matching level: species

strain history

@refhistory
6752<- J. G. Lorén,Univers. Barcelona; 848
121005CIP <- 2005, CECT <- 2004, D. Minana-Galbis, Barcelona Univ., Barcelona, Spain: strain 848

doi: 10.13145/bacdive262.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas molluscorum
  • full scientific name: Aeromonas molluscorum Miñana-Galbis et al. 2004

@ref: 6752

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas molluscorum

full scientific name: Aeromonas molluscorum Miñana-Galbis et al. 2004

strain designation: 848T, 848

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotilityflagellum arrangement
23257negative1.2-2.2 µm0.5-1.0 µmrod-shapedyesmonotrichous, polar
121005negativerod-shapedyes

colony morphology

  • @ref: 23257
  • colony size: 3-4 mm
  • colony color: beige
  • colony shape: circular
  • incubation period: 2 days
  • medium used: TSA

pigmentation

  • @ref: 23257
  • production: yes
  • color: brown

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
6752CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
23257MacConkey agaryes
23257Trypticase Soy Agar (TSA)yes
40493MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121005CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
6752positivegrowth28mesophilic
23257positivegrowth4psychrophilic
23257positivegrowth37mesophilic
23257nogrowth40.5thermophilic
23257positiveoptimum25-30mesophilic
40493positivegrowth30mesophilic
121005positivegrowth5-30
121005nogrowth37mesophilic
121005nogrowth41thermophilic

culture pH

@refabilitytypepHPH range
23257positivegrowth9alkaliphile
23257nogrowth4.5

Physiology and metabolism

oxygen tolerance

  • @ref: 121005
  • oxygen tolerance: facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
23257NaClpositivegrowth3 %
23257NaClnogrowth6 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2325728053melibiose-builds acid from
2325716634raffinose-builds acid from
2325765327D-xylose-builds acid from
2325762345L-rhamnose-builds acid from
2325717716lactose-builds acid from
2325730911sorbitol-builds acid from
2325715356cysteine-builds gas from
2325717634D-glucose-builds gas from
2325716094thiosulfate-builds gas from
2325715963ribitol-carbon source
232576731melezitose-carbon source
2325728053melibiose-carbon source
2325716634raffinose-carbon source
2325765327D-xylose-carbon source
2325716813galactitol-carbon source
2325717268myo-inositol-carbon source
2325715443inulin-carbon source
2325762345L-rhamnose-carbon source
2325717266L-sorbose-carbon source
2325717716lactose-carbon source
2325730911sorbitol-carbon source
232574767elastin-hydrolysis
2325728017starch-hydrolysis
2325716199urea-hydrolysis
2325715318xanthine-hydrolysis
2325718305arbutin+builds acid from
2325717057cellobiose+builds acid from
2325712936D-galactose+builds acid from
2325716899D-mannitol+builds acid from
2325716024D-mannose+builds acid from
2325716551D-trehalose+builds acid from
2325723652dextrin+builds acid from
2325717754glycerol+builds acid from
2325730849L-arabinose+builds acid from
2325717992sucrose+builds acid from
2325730089acetate+carbon source
2325718305arbutin+carbon source
2325716947citrate+carbon source
2325717057cellobiose+carbon source
2325715824D-fructose+carbon source
2325712936D-galactose+carbon source
2325717634D-glucose+carbon source
2325716899D-mannitol+carbon source
2325716024D-mannose+carbon source
2325716551D-trehalose+carbon source
232574853esculin+carbon source
2325717754glycerol+carbon source
2325730849L-arabinose+carbon source
2325716467L-arginine+carbon source
2325715971L-histidine+carbon source
2325717306maltose+carbon source
23257506227N-acetylglucosamine+carbon source
2325717814salicin+carbon source
2325717992sucrose+carbon source
2325717234glucose+fermentation
2325718305arbutin+hydrolysis
2325716991dna+hydrolysis
232574853esculin+hydrolysis
232575291gelatin+hydrolysis
2325717234glucose+oxidation
2325717632nitrate+reduction
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate+builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128017starch+builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose+builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol+builds acid from
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis
12100529864mannitol+fermentation
12100516947citrate+carbon source
12100517234glucose+fermentation
12100517716lactose-fermentation
12100517632nitrate+reduction
12100516301nitrite-reduction
12100515792malonate-assimilation
121005132112sodium thiosulfate-builds gas from
12100517234glucose+degradation

antibiotic resistance

@refChEBImetaboliteis antibioticis resistantresistance conc.is intermediateintermediate conc.is sensitivesensitivity conc.group ID
2325728971ampicillinyesyes10 µg
2325718208penicillin gyesyes10 µg
2325748923erythromycinyesyes15 µg
2325773908vibriostatyesyes150 µg
2325717076streptomycinyesyes10 µg
232578309polymyxin byesyes300 Unit
2325717833gentamicinyesyes10 µg
23257471744imipenemyesyes10 µg
2325728864tobramycinyesyes10 µg
232572637amikacinyesyes30 µg
232572676amoxicillinyesyes30 µg10
23257209807cefoxitinyesyes30 µg
2325729007ceftriaxoneyesyes30 µg
232573515cefuroximeyesyes30 µg
2325727902tetracyclineyesyes30 µg
23257100241ciprofloxacinyesyes5 µg
2325737943colistinyesyes50 µg
2325748947clavulanic acidyesyes30 µg10
1210050129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)yesyesno

metabolite production

@refChebi-IDmetaboliteproduction
2325716136hydrogen sulfideno
2325715688acetoinno
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno
12100535581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-testindole test
2325715688acetoin-
2325717234glucose+
6836815688acetoin-
6836835581indole-
12100515688acetoin-
12100517234glucose+

enzymes

@refvalueactivityec
23257arginine dihydrolase+3.5.3.6
23257beta-galactosidase+3.2.1.23
23257catalase+1.11.1.6
23257cytochrome oxidase+1.9.3.1
23257lysine decarboxylase-4.1.1.18
23257ornithine decarboxylase-4.1.1.17
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase+3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68368cytochrome oxidase+1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23
121005oxidase+
121005beta-galactosidase+3.2.1.23
121005alcohol dehydrogenase+1.1.1.1
121005gelatinase+
121005amylase+
121005DNase+
121005caseinase+3.4.21.50
121005catalase+1.11.1.6
121005tween esterase+
121005lecithinase+
121005lipase-
121005lysine decarboxylase-4.1.1.18
121005ornithine decarboxylase-4.1.1.17
121005phenylalanine ammonia-lyase+4.3.1.24
121005tryptophan deaminase-
121005urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
121005-+++-+--+-++-+++++--

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
6752++---------++---+-+++

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
121005+--++----++++----+---+-+++++--++---++/----------+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
121005+++++--+-++--+-+-++++----------+-+---------------+-----+---++-----------------+++-+---+--++-+++----

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinentisolation date
6752wedge shells (Donax trunculus)Donax trunculusBarcelonaSpainESPEurope
58966Wedge-shells (Donax trunculus)BarcelonaSpainESPEurope
121005Wedge-shells, Donax trunculusBarcelonaSpainESPEurope1997

isolation source categories

  • Cat1: #Host
  • Cat2: #Invertebrates (Other)
  • Cat3: #Mollusca

taxonmaps

  • @ref: 69479
  • File name: preview.99_485.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_485&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: AY987772
  • Sequence Identity:
  • Total samples: 313
  • soil counts: 16
  • aquatic counts: 156
  • animal counts: 131
  • plant counts: 10

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
67521Risk group (German classification)
1210051Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Aeromonas molluscorum strain LMG 22214 16S ribosomal RNA gene, complete sequenceAY9877721510ena271417
6752Aeromonas molluscorum strain 848T 16S ribosomal RNA gene, complete sequenceAY5326901506ena271417

Genome sequences

  • @ref: 66792
  • description: Aeromonas molluscorum 848T, CECT 5864
  • accession: 2534681676
  • assembly level: draft
  • database: img
  • NCBI tax ID: 1268236

GC content

  • @ref: 23257
  • GC-content: 59.0-59.4
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 6752

culture collection no.: DSM 17090, CECT 5864, LMG 22214, CCUG 50741, CIP 108676

straininfo link

  • @ref: 69944
  • straininfo: 130818

literature

  • topic: Phylogeny
  • Pubmed-ID: 15545437
  • title: Aeromonas molluscorum sp. nov., isolated from bivalve molluscs.
  • authors: Minana-Galbis D, Farfan M, Fuste MC, Loren JG
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.63202-0
  • year: 2004
  • mesh: Aeromonas/chemistry/*classification/*isolation & purification/physiology, Animals, Bacterial Typing Techniques, Base Composition, Carboxy-Lyases/analysis, DNA Fingerprinting, DNA, Bacterial/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Genes, rRNA, Glucose/metabolism, Indoles/metabolism, Molecular Sequence Data, Mollusca/*microbiology, Nucleic Acid Hybridization, Phylogeny, Polymorphism, Genetic, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Starch/metabolism
  • topic2: Enzymology

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
6752Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17090)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17090
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
23257David Minana-Galbis, Maribel Farfán, M. Carme Fusté, J. Gaspar Lorén10.1099/ijs.0.63202-0Aeromonas molluscorum sp. nov., isolated from bivalve molluscsIJSEM 54: 2073-2078 200415545437
40493Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/6331
58966Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 50741)https://www.ccug.se/strain?id=50741
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68368Automatically annotated from API 20E
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69944Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID130818.1StrainInfo: A central database for resolving microbial strain identifiers
121005Curators of the CIPCollection of Institut Pasteur (CIP 108676)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108676