Strain identifier
BacDive ID: 2604
Type strain: 
Species: Clostridium innocuum
Strain Designation: SB23
Strain history: <- P. J. Turnbaugh, Center for Genome Sciences, Washington University School of Medicine, St Louis; SB23
NCBI tax ID(s): 1522 (species)
General
@ref: 16617
BacDive-ID: 2604
DSM-Number: 22910
keywords: Bacteria, anaerobe, mesophilic
description: Clostridium innocuum SB23 is an anaerobe, mesophilic bacterium that was isolated from gnotobiotic mouse colonized with a human fecal sample.
NCBI tax id
- NCBI tax id: 1522
- Matching level: species
strain history
- @ref: 16617
- history: <- P. J. Turnbaugh, Center for Genome Sciences, Washington University School of Medicine, St Louis; SB23
doi: 10.13145/bacdive2604.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium innocuum
- full scientific name: Clostridium innocuum Smith and King 1962 (Approved Lists 1980)
@ref: 16617
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium innocuum
full scientific name: Clostridium innocuum Smith and King 1962
strain designation: SB23
type strain: no
Culture and growth conditions
culture medium
- @ref: 16617
- name: PY + X MEDIUM (DSMZ Medium 104b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104b
- composition: Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
culture temp
- @ref: 16617
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 16617
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 16617
- sample type: gnotobiotic mouse colonized with a human fecal sample
- geographic location: Saint Louis, Missouri
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host | #Mammals | #Muridae (Mouse/Rat) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
Safety information
risk assessment
- @ref: 16617
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 16617
culture collection no.: DSM 22910
straininfo link
- @ref: 72135
- straininfo: 407396
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 16617 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22910) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22910 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 72135 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID407396.1 | StrainInfo: A central database for resolving microbial strain identifiers |