Strain identifier

BacDive ID: 260

Type strain: Yes

Species: Aeromonas bestiarum

Strain Designation: 218

Strain history: CIP <- 1974, M.Y. Popoff, Inst. Pasteur, Paris, France: strain 218, Aeromonas hydrophila, biovar 1

NCBI tax ID(s): 105751 (species)

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General

@ref: 5195

BacDive-ID: 260

DSM-Number: 13956

keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, motile, rod-shaped, human pathogen

description: Aeromonas bestiarum 218 is an aerobe, mesophilic, Gram-negative human pathogen that was isolated from diseased fish.

NCBI tax id

  • NCBI tax id: 105751
  • Matching level: species

strain history

@refhistory
5195<- ATCC <- F. W. Hickman-Brenner <- M. Popoff; 218
417641974, M.Y. Popoff, Inst. Pasteur, Paris, France: strain 218, Aeromonas hydrophila, biovar 1
116794CIP <- 1974, M.Y. Popoff, Inst. Pasteur, Paris, France: strain 218, Aeromonas hydrophila, biovar 1

doi: 10.13145/bacdive260.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas bestiarum
  • full scientific name: Aeromonas bestiarum Ali et al. 1996

@ref: 5195

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas bestiarum

full scientific name: Aeromonas bestiarum Ali et al. 1996

strain designation: 218

type strain: yes

Morphology

cell morphology

  • @ref: 116794
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 116794
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5195CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
41764MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
116794CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
5195positivegrowth30mesophilic
41764positivegrowth30mesophilic
55243positivegrowth30-37mesophilic
116794positivegrowth15-37
116794nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
55243aerobe
116794facultative anaerobe

spore formation

  • @ref: 116794
  • spore formation: no

halophily

@refsaltgrowthtested relationconcentration
116794NaClpositivegrowth0-4 %
116794NaClnogrowth6 %
116794NaClnogrowth8 %
116794NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine+hydrolysis
6836927897tryptophan+energy source
6836917632nitrate+reduction
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose+fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis
11679416947citrate-carbon source
1167944853esculin+hydrolysis
11679417234glucose+fermentation
11679417716lactose-fermentation
11679417632nitrate+reduction
11679416301nitrite+reduction
116794132112sodium thiosulfate-builds gas from
11679417234glucose+degradation
11679417632nitrate+respiration

antibiotic resistance

  • @ref: 116794
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleyes
6836815688acetoinyes
6836835581indoleyes
6836816136hydrogen sulfideno
11679435581indoleyes

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6836935581indole+
6836815688acetoin+
6836835581indole+

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)+
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase+3.5.3.6
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23
116794oxidase+
116794beta-galactosidase+3.2.1.23
116794alcohol dehydrogenase+1.1.1.1
116794gelatinase+
116794amylase+
116794DNase+
116794catalase+1.11.1.6
116794tween esterase+
116794gamma-glutamyltransferase+2.3.2.2
116794lecithinase+
116794lipase+
116794lysine decarboxylase-4.1.1.18
116794ornithine decarboxylase-4.1.1.17
116794tryptophan deaminase-
116794urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
116794-++++++++-+--+-+++--

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
5195++------+++++--++-+++

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
5195++++-+++++++++++-+--+
5195++-+-+++++++++++-+--+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
116794+++++--+-++--+---++++-++-------+-+-------+-------+---------++-----------+---+--++-+---+--++-+++--+-

Isolation, sampling and environmental information

isolation

@refsample typesampling date
5195diseased fish
55243Fish1974
116794Animal, Fish

isolation source categories

Cat1Cat2
#Host#Fishes
#Infection#Disease

taxonmaps

  • @ref: 69479
  • File name: preview.99_485.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_485&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: X60406
  • Sequence Identity:
  • Total samples: 313
  • soil counts: 16
  • aquatic counts: 156
  • animal counts: 131
  • plant counts: 10

Safety information

risk assessment

@refpathogenicity humanpathogenicity animalbiosafety levelbiosafety level comment
5195yes, in single casesyes, in single cases1Risk group (German classification)
1167941Risk group (French classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Aeromonas bestiarum 16S rRNA gene, strain CIP 7430
  • accession: X60406
  • length: 1503
  • database: ena
  • NCBI tax ID: 105751

External links

@ref: 5195

culture collection no.: CCUG 41859, CIP 74.30, DSM 13956, ATCC 51108, CIP 7430, LMG 13444

straininfo link

  • @ref: 69942
  • straininfo: 389400

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5195Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13956)https://www.dsmz.de/collection/catalogue/details/culture/DSM-13956
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
41764Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/10722
55243Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 41859)https://www.ccug.se/strain?id=41859
68368Automatically annotated from API 20E
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69942Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID389400.1StrainInfo: A central database for resolving microbial strain identifiers
116794Curators of the CIPCollection of Institut Pasteur (CIP 74.30)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2074.30