Strain identifier
BacDive ID: 2529
Type strain:
Species: Clostridium acetobutylicum
Strain Designation: 2291, W
Culture col. no.: DSM 792, ATCC 824, VKM B-1787, CCUG 42182, LMG 5710, CECT 508, IFO 13948
General
@ref: 449
BacDive-ID: 2529
DSM-Number: 792
keywords: mesophilic, anaerobe, Bacteria, 16S sequence, genome sequence, alcohol production
description: Clostridium acetobutylicum 2291 is an anaerobe, mesophilic bacterium that produces alcohol and was isolated from cornmeal.
strain history: <- ATCC <- E. R. Weyer, Yale University, Laboratory of General Bacteriology, New Haven, Connecticut, USA (Granulobacter pectinovorum)
doi: 10.13145/bacdive2529.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/firmicutes
- domain: Bacteria
- phylum: Firmicutes
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium acetobutylicum
- full scientific name: Clostridium acetobutylicum McCoy et al. 1926 (Approved Lists 1980)
@ref: 449
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium acetobutylicum
full scientific name: Clostridium acetobutylicum McCoy et al. 1926 emend. Keis et al. 2001
strain designation: 2291, W
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | link |
---|---|---|---|
449 | CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411), anaerobic | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium411.pdf |
449 | PY + X MEDIUM (DSMZ Medium 104b), anaerobic | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium104b.pdf |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
449 | positive | growth | 37 | mesophilic |
55354 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
449 | anaerobe |
55354 | anaerobe |
compound production
@ref | compound |
---|---|
449 | acetone |
449 | n butanol |
449 | autobacteriocin |
449 | acidolysin |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
55354 | - | - | + | + | - | - | - | - | - | - | + | - | - | - | - | + | + | - | - | - |
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
55354 | - | - | - | - | + | + | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 449
- sample type: cornmeal
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
#Engineered | #Food production |
Safety information
risk assessment
- @ref: 449
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Clostridium acetobutylicum ATCC 824 16S ribosomal RNA (rrn) gene, partial sequence | U16166 | 1411 | ena | 272562 |
20218 | Clostridium acetobutylicum DSM 792 16S ribosomal RNA (rrn) gene, partial sequence | U17030 | 554 | ena | 272562 |
20218 | C.acetobutylicum (ATCC 824, T) 16S rRNA | X78070 | 1389 | ena | 272562 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Clostridium acetobutylicum ATCC 824 | GCA_000008765 | complete | ncbi | 272562 |
66792 | Clostridium acetobutylicum LJ4 | GCA_003254825 | chromosome | ncbi | 1488 |
66792 | Clostridium acetobutylicum DJ024 | GCA_013297095 | contig | ncbi | 1488 |
66792 | Clostridium acetobutylicum DJ310 | GCA_013296345 | contig | ncbi | 1488 |
66792 | Clostridium acetobutylicum NCCB 24020 | GCA_002006385 | contig | ncbi | 1488 |
66792 | Clostridium acetobutylicum BOH3 | GCA_006546765 | scaffold | ncbi | 1488 |
66792 | Clostridium acetobutylicum WA | GCA_002954145 | scaffold | ncbi | 1488 |
66792 | Clostridium acetobutylicum JB200 | GCA_002216285 | scaffold | ncbi | 1488 |
66792 | Clostridium acetobutylicum GXAS18-1 | GCA_000785855 | scaffold | ncbi | 1488 |
66792 | Clostridium acetobutylicum ATCC 824 | 272562.8 | complete | patric | 272562 |
66792 | Clostridium acetobutylicum ATCC 824 | 272562.61 | plasmid | patric | 272562 |
66792 | Clostridium acetobutylicum GXAS18-1 | 1488.5 | wgs | patric | 1488 |
66792 | Clostridium acetobutylicum strain BOH3 | 1488.48 | wgs | patric | 1488 |
66792 | Clostridium acetobutylicum strain LJ4 | 1488.39 | complete | patric | 1488 |
66792 | Clostridium acetobutylicum strain NCCB 24020 | 1488.19 | wgs | patric | 1488 |
66792 | Clostridium acetobutylicum strain WA | 1488.38 | wgs | patric | 1488 |
66792 | Clostridium acetobutylicum DJ313 (Re-Annotation) | 2853669153 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ311 (Re-Annotation) | 2875888368 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ024 | 2706794910 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ310 (Re-Annotation) | 2853664947 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ024 (Re-Annotation) | 2852917358 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ074 | 2724679640 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ310 | 2772190829 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ074 (Re-Annotation) | 2853072447 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ313 | 2772190827 | permanent | img | 1488 |
66792 | Clostridium acetobutylicum DJ311 | 2772190980 | permanent | img | 1488 |
GC content
- @ref: 449
- GC-content: 28.0
External links
@ref: 449
culture collection no.: DSM 792, ATCC 824, VKM B-1787, CCUG 42182 C, LMG 5710, CECT 508, IFO 13948
straininfo link
@ref | passport |
---|---|
20218 | http://www.straininfo.net/strains/7820 |
20218 | http://www.straininfo.net/strains/7818 |
20218 | http://www.straininfo.net/strains/156989 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
449 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 792) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-792 | |||
20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
55354 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 42182 C) | https://www.ccug.se/strain?id=42182 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |