Strain identifier
BacDive ID: 24850
Type strain: 
Species: Parvopolyspora pallida
Strain Designation: 416
Strain history: X. Liu 416.
NCBI tax ID(s): 65509 (species)
General
@ref: 11367
BacDive-ID: 24850
DSM-Number: 43888
keywords: 16S sequence, Bacteria, mesophilic
description: Parvopolyspora pallida 416 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 65509
- Matching level: species
strain history
| @ref | history |
|---|---|
| 11367 | <- JCM <- X. Liu, 416 |
| 67770 | X. Liu 416. |
doi: 10.13145/bacdive24850.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Actinomycetales
- family: Micropolysporaceae
- genus: Parvopolyspora
- species: Parvopolyspora pallida
- full scientific name: Parvopolyspora pallida Liu and Lian 1986
@ref: 11367
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micropolysporaceae
genus: Parvopolyspora
species: Parvopolyspora pallida
full scientific name: Parvopolyspora pallida Liu and Lian
strain designation: 416
type strain: yes
Culture and growth conditions
culture medium
- @ref: 11367
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 11367 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(H6), MK-9(H8)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 11367 | soil | ||||
| 67770 | Soil | Nanning City, Guangxi Zhuang Autonomous Region | China | CHN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_49981.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_239;96_2558;97_10845;98_13314;99_49981&stattab=map
- Last taxonomy: Actinomadura
- 16S sequence: AB006157
- Sequence Identity:
- Total samples: 17
- soil counts: 10
- aquatic counts: 1
- animal counts: 6
Sequence information
16S sequences
- @ref: 20218
- description: Parvopolyspora pallida gene for 16S ribosomal RNA, partial sequence
- accession: AB006157
- length: 1468
- database: ena
- NCBI tax ID: 65509
GC content
- @ref: 67770
- GC-content: 72.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 11367
culture collection no.: DSM 43888, ATCC 51645, IMET 43867, JCM 6053, IFO 14788, KCTC 9188, NBRC 14788, VKM Ac-1270
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 11367 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43888) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-43888 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |