Strain identifier

BacDive ID: 24799

Type strain: Yes

Species: Proteinivorax tanatarense

Strain Designation: Z-910

Strain history: <- V. Kevbrin, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; Z-910 <- V. V. Kevbrin {2010}

NCBI tax ID(s): 1260629 (species)

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General

@ref: 21272

BacDive-ID: 24799

DSM-Number: 25977

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Proteinivorax tanatarense Z-910 is an anaerobe, mesophilic bacterium that was isolated from decaying algal bloom from an alkaline lake.

NCBI tax id

  • NCBI tax id: 1260629
  • Matching level: species

strain history

  • @ref: 21272
  • history: <- V. Kevbrin, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; Z-910 <- V. V. Kevbrin {2010}

doi: 10.13145/bacdive24799.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Proteinivoracaceae
  • genus: Proteinivorax
  • species: Proteinivorax tanatarense
  • full scientific name: Proteinivorax tanatarense Kevbrin et al. 2014

@ref: 21272

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Proteinivoraceae

genus: Proteinivorax

species: Proteinivorax tanatarense

full scientific name: Proteinivorax tanatarense Kevbrin et al. 2014

strain designation: Z-910

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 21272
  • name: PROTEINIVORAX MEDIUM (DSMZ Medium 1505)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1505
  • composition: Name: PROTEINIVORAX MEDIUM (DSMZ Medium 1505) Composition: Na2CO3 60.0 g/l NaHCO3 50.0 g/l NaCl 20.0 g/l Tryptone 3.0 g/l Na-thioglycolate 1.0 g/l KH2PO4 0.3 g/l MgSO4 x 7 H2O 0.12 g/l CaCl2 x 2 H2O 0.03 g/l HCl 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

culture temp

  • @ref: 21272
  • growth: positive
  • type: growth
  • temperature: 35
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 21272
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 21272
  • sample type: decaying algal bloom from an alkaline lake
  • geographic location: Altai region, lake Tanatar VI (51°37'29.75''N and 79°48'28.37''E)
  • country: Russia
  • origin.country: RUS
  • continent: Asia
  • latitude: 51.6249
  • longitude: 79.8079

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Host#Algae
#Host#Plants#Decomposing plant
#Condition#Alkaline

taxonmaps

  • @ref: 69479
  • File name: preview.99_151250.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3665;96_57383;97_74221;98_99928;99_151250&stattab=map
  • Last taxonomy: Proteinivorax
  • 16S sequence: JQ904542
  • Sequence Identity:
  • Total samples: 186
  • soil counts: 23
  • aquatic counts: 123
  • animal counts: 37
  • plant counts: 3

Safety information

risk assessment

  • @ref: 21272
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
21272Proteinivorax tanatarense strain Z-910 16S ribosomal RNA gene, partial sequenceJQ9045411488ena1260629
21272Proteinivorax tanatarense strain Z-910 from Russia 16S ribosomal RNA gene, partial sequenceJQ9045421488ena1260629

GC content

  • @ref: 21272
  • GC-content: 32.2
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 21272

culture collection no.: DSM 25977, VKM B-2763

straininfo link

  • @ref: 88621
  • straininfo: 406816

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny23807772Proteinivorax tanatarense gen. nov., sp. nov., an anaerobic, haloalkaliphilic, proteolytic bacterium isolated from a decaying algal bloom, and proposal of Proteinivoraceae fam. nov.Kevbrin V, Boltyanskaya Y, Zhilina T, Kolganova T, Lavrentjeva E, Kuznetsov BExtremophiles10.1007/s00792-013-0557-12013Bacteria, Anaerobic/classification/genetics/*isolation & purification/metabolism, Cellobiose/metabolism, DNA, Bacterial/chemistry, *Eutrophication, Fermentation, Fumarates/metabolism, Glycerol/metabolism, Gram-Positive Bacteria/classification/genetics/*isolation & purification/metabolism, Lakes/microbiology, Phylogeny, Pyruvic Acid/metabolism, RNA, Ribosomal, 16S/genetics, Ribonucleosides/metabolism, Salt Tolerance, Sulfur/metabolismMetabolism
Phylogeny28975474Proteinivorax hydrogeniformans sp. nov., an anaerobic, haloalkaliphilic bacterium fermenting proteinaceous compounds with high hydrogen production.Boltyanskaya Y, Detkova E, Pimenov N, Kevbrin VAntonie Van Leeuwenhoek10.1007/s10482-017-0949-92017Bacteria, Anaerobic/*metabolism, Clostridiales/chemistry/classification/*metabolism/physiology, *Fermentation, Hydrogen/*metabolism, Metabolomics/methods, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNAMetabolism

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21272Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-25977Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25977)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
88621Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID406816.1