Archive BacDiveID:10.13145/bacdive24717.20230509.8.1

Strain identifier

BacDive ID: 24717

Type strain:

Species: Nevskia aquatilis

Strain Designation: F2-63

Strain history: <- LMG <- L. Franca, Univ. Coimbra, Portugal; F2-63

NCBI tax ID(s): 1175514 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 20678

BacDive-ID: 24717

DSM-Number: 28011

keywords: 16S sequence, Bacteria, mesophilic

description: Nevskia aquatilis F2-63 is a mesophilic bacterium that was isolated from water from a mineral water aquifer in 150 m depth.

NCBI tax id

NCBI tax id: 1175514
Matching level: species

strain history

@ref: 20678
history: <- LMG <- L. Franca, Univ. Coimbra, Portugal; F2-63

doi: 10.13145/bacdive24717.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Nevskiales
family: Nevskiaceae
genus: Nevskia
species: Nevskia aquatilis
full scientific name: Nevskia aquatilis Leandro et al. 2013

@ref: 20678

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Xanthomonadales

family: Nevskiaceae

genus: Nevskia

species: Nevskia aquatilis

full scientific name: Nevskia aquatilis Leandro et al. 2013

strain designation: F2-63

type strain: yes

Morphology

colony morphology

@ref: 20678
incubation period: 3-7 days

multimedia

@ref: 20678
multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_28011.jpg
intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@ref: 20678
name: REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)
growth: yes
link: https://mediadive.dsmz.de/medium/830c
composition: Name: REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c) Composition: Agar 15.0 g/l Yeast extract 0.5 g/l Proteose peptone 0.5 g/l Casamino acids 0.5 g/l Glucose 0.5 g/l Starch 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

@ref: 20678
growth: positive
type: growth
temperature: 28
range: mesophilic

Isolation, sampling and environmental information

isolation

@ref: 20678
sample type: water from a mineral water aquifer in 150 m depth
country: Portugal
origin.country: PRT
continent: Europe

isolation source categories

Cat1: #Environmental
Cat2: #Aquatic

taxonmaps

@ref: 69479
File name: preview.99_31904.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_146;96_15505;97_18979;98_23677;99_31904&stattab=map
Last taxonomy: Nevskia aquatilis subclade
16S sequence: JQ710440
Sequence Identity:
Total samples: 1278
soil counts: 211
aquatic counts: 333
animal counts: 672
plant counts: 62

Safety information

risk assessment

@ref: 20678
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 20678
description: Nevskia aquatilis strain F2-63 16S ribosomal RNA gene, partial sequence
accession: JQ710440
length: 1468
database: ena
NCBI tax ID: 1175514

External links

@ref: 20678

culture collection no.: DSM 28011, CECT 7897, LMG 26345

straininfo link

@ref: 88547
straininfo: 376916

literature

topic	Pubmed-ID	title	authors	journal	DOI	year	mesh	topic2
Phylogeny	22742878	Nevskia aquatilis sp. nov. and Nevskia persephonica sp. nov., isolated from a mineral water aquifer and the emended description of the genus Nevskia.	Leandro T, Franca L, Nobre MF, Schumann P, Rossello-Mora R, da Costa MS	Syst Appl Microbiol	10.1016/j.syapm.2012.05.001	2012	Gammaproteobacteria/classification/genetics/isolation & purification/physiology, Hydrogen-Ion Concentration, Molecular Sequence Data, Natural Springs/*microbiology, Phylogeny, Portugal, Temperature	Genetics
Phylogeny	30506271	Nevskia lacus sp. nov., a gammaproteobacterium isolated from a eutrophic lake.	Cui Y, Chun SJ, Cho AR, Wong SK, Lee HG, Oh HM, Ahn CY	Antonie Van Leeuwenhoek	10.1007/s10482-018-1206-6	2018	Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Eutrophication, Fatty Acids/chemistry/metabolism, Lakes/chemistry/microbiology, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Xanthomonadaceae/classification/genetics/isolation & purification/metabolism	Metabolism
Phylogeny	30908181	Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm.	Sheu SY, Chen TY, Young CC, Chen WM	Int J Syst Evol Microbiol	10.1099/ijsem.0.003365	2019	Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fresh Water/microbiology, Gammaproteobacteria/classification/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Taiwan, Ubiquinone/chemistry	Transcriptome

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
20678	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-28011	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28011)
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.	MicrobeAtlas 1.0 beta	https://microbeatlas.org/
88547	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID376916.1