Strain identifier

BacDive ID: 24715

Type strain: Yes

Species: Actinophytocola gilvus

Strain Designation: I12A-02593

Culture col. no.: DSM 45828, CPCC 203543, KCTC 29165, NBRC 109453

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General

@ref: 20906

BacDive-ID: 24715

DSM-Number: 45828

keywords: Bacteria, 16S sequence, mesophilic

description: Actinophytocola gilvus I12A-02593 is a mesophilic bacterium that was isolated from desert soil crust.

strain history: <- Y.-Q. Zhang, Chinese Academy Medical Sci. and Peking Union Medical College, Beijing, China; CPCC 203543 <- H.-M. Sun et al.

doi: 10.13145/bacdive24715.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Actinophytocola
  • species: Actinophytocola gilvus
  • full scientific name: Actinophytocola gilvus Sun et al. 2014

@ref: 20906

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Actinophytocola

species: Actinophytocola gilvus

full scientific name: Actinophytocola gilvus Sun et al. 2014

strain designation: I12A-02593

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 20906
  • name: GPHF-MEDIUM (DSMZ Medium 553)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium553.pdf

culture temp

  • @ref: 20906
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 20906
  • sample type: desert soil crust
  • geographic location: Ningxia Hui Autonomous Region, Shapotou region of Tengger Desert
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Desert
#Environmental#Terrestrial#Soil

Safety information

risk assessment

  • @ref: 20906
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20906
  • description: Actinophytocola gilvus strain I12A-02593 16S ribosomal RNA gene, partial sequence
  • accession: KF955588
  • length: 1334
  • database: ena
  • NCBI tax ID: 1468259

GC content

  • @ref: 20906
  • GC-content: 70.1
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 20906

culture collection no.: DSM 45828, CPCC 203543, KCTC 29165, NBRC 109453

straininfo link

@refpassport
20218http://www.straininfo.net/strains/897817
20218http://www.straininfo.net/strains/897816
20218http://www.straininfo.net/strains/897819
20218http://www.straininfo.net/strains/897818

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
20906Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45828Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45828)