Strain identifier
BacDive ID: 24673
Type strain:
Species: Luteimonas lutimaris
Strain Designation: G3
Strain history: C. O. Jeon G3.
NCBI tax ID(s): 698645 (species)
version 8.1 (current version)
General
@ref: 20634
BacDive-ID: 24673
DSM-Number: 25700
keywords: 16S sequence, Bacteria, mesophilic
description: Luteimonas lutimaris G3 is a mesophilic bacterium that was isolated from tidal flat.
NCBI tax id
- NCBI tax id: 698645
- Matching level: species
strain history
@ref | history |
---|---|
20634 | <- C. O. Jeon, Chung-Ang Univ., Seoul, Republic of Korea; G3 <- Ch. B. Sil, Chung-Ang Univ., Seoul, Republic of Korea |
67770 | C. O. Jeon G3. |
doi: 10.13145/bacdive24673.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Lysobacterales
- family: Lysobacteraceae
- genus: Luteimonas
- species: Luteimonas lutimaris
- full scientific name: Luteimonas lutimaris Park et al. 2011
@ref: 20634
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Lysobacteraceae, not assigned to order
family: Lysobacteraceae
genus: Luteimonas
species: Luteimonas lutimaris
full scientific name: Luteimonas lutimaris Park et al. 2011
strain designation: G3
type strain: yes
Culture and growth conditions
culture medium
- @ref: 20634
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
20634 | positive | growth | 28 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-8
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
20634 | tidal flat | Taean coast | Republic of Korea | KOR | Asia |
67770 | Tidal flat of the Taean coast | Republic of Korea | KOR | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Tidal flat
taxonmaps
- @ref: 69479
- File name: preview.99_145815.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17;96_2080;97_2507;98_3101;99_145815&stattab=map
- Last taxonomy: Luteimonas lutimaris
- 16S sequence: GU199001
- Sequence Identity:
- Total samples: 37
- soil counts: 7
- aquatic counts: 24
- animal counts: 3
- plant counts: 3
Safety information
risk assessment
- @ref: 20634
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20634
- description: Luteimonas lutimaris strain G3 16S ribosomal RNA gene, complete sequence
- accession: GU199001
- length: 1467
- database: ena
- NCBI tax ID: 698645
GC content
- @ref: 67770
- GC-content: 69.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 20634
culture collection no.: DSM 25700, JCM 16916, KACC 14929
straininfo link
- @ref: 88511
- straininfo: 399016
literature
- topic: Phylogeny
- Pubmed-ID: 21186291
- title: Luteimonas lutimaris sp. nov., isolated from a tidal flat.
- authors: Park YJ, Park MS, Lee SH, Park W, Lee K, Jeon CO
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.029173-0
- year: 2010
- mesh: Base Composition, DNA, Bacterial/genetics, Fatty Acids/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology, Xanthomonadaceae/*classification/genetics/*isolation & purification/metabolism
- topic2: Metabolism
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
20634 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25700 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25700) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
88511 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399016.1 |