Strain identifier

BacDive ID: 24659

Type strain: No

Species: Vibrio parahaemolyticus

Strain Designation: VL 1225

Strain history: CIP <- 2016, DSMZ <- NCTC <- A.L. Furniss, PHLS, Guidford, UK: strain VL 1225

NCBI tax ID(s): 670 (species)

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General

@ref: 20459

BacDive-ID: 24659

DSM-Number: 27657

keywords: Bacteria, aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Vibrio parahaemolyticus VL 1225 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Human faeces,patient with enteritis.

NCBI tax id

  • NCBI tax id: 670
  • Matching level: species

strain history

@refhistory
20459<- NCTC <- A. L. Furniss, PHLS Guildford, UK
121561CIP <- 2016, DSMZ <- NCTC <- A.L. Furniss, PHLS, Guidford, UK: strain VL 1225

doi: 10.13145/bacdive24659.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio parahaemolyticus
  • full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Pasteurella parahaemolytica
    20215Beneckea parahaemolytica

@ref: 20459

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio parahaemolyticus

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 emend. West et al. 1986

strain designation: VL 1225

type strain: no

Morphology

cell morphology

  • @ref: 121561
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
20459REACTIVATION WITH LIQUID MEDIUM 115 (DSMZ Medium 115a)yeshttps://mediadive.dsmz.de/medium/115aName: REACTIVATION WITH LIQUID MEDIUM 115 (DSMZ Medium 115a) Composition: Agar 15.0 g/l (optional) NaCl 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
121561CIP Medium 13yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13

culture temp

@refgrowthtypetemperaturerange
20459positivegrowth28mesophilic
63427positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 63427
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose-fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine+degradation
6836825094lysine+degradation
6836829016arginine-hydrolysis
6837418257ornithine+degradation
6837429016arginine-hydrolysis
6837425094lysine-degradation
6837416199urea-hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837415792malonate-assimilation
6837427897tryptophan+energy source
6837417634D-glucose-builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleyes
6836815688acetoinno
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837435581indole+
6836815688acetoin-
6836835581indole+

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase-3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase+4.1.1.17
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase+4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    63427C12:03.412
    63427C14:05.914
    63427C15:05.615
    63427C16:013.616
    63427C17:01.917
    63427C12:0 3OH1.813.455
    63427C13:0 3OH/C15:1 i I/H0.714.469
    63427C13:0 iso212.612
    63427C14:0 3OH/C16:1 ISO I3.515.485
    63427C15:0 ISO1.614.621
    63427C15:0 ISO 3OH1.116.135
    63427C15:1 ω8c0.914.792
    63427C16:0 iso0.915.626
    63427C16:1 ω7c36.815.819
    63427C16:1 ω9c0.515.774
    63427C17:0 iso1.616.629
    63427C17:1 ω6c1.616.862
    63427C17:1 ω8c3.916.792
    63427C18:1 ω7c /12t/9t10.217.824
    63427C18:2 ω6,9c/C18:0 ANTE2.217.724
    63427unknown 12.4860.612.486
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
63427--+++---+-+++-----+-+
20459--+++---+-+++-----+-+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
63427+------+++-+----+--------+----+-

Isolation, sampling and environmental information

isolation

@refsample typesampling dategeographic locationcountryorigin.countrycontinent
63427Human faeces,patient with enteritis1980-01-01Guildford,PHLSUnited KingdomGBREurope
20459faeces of patient with enteritidisUnited KingdomGBREurope
121561Human, FaecesEnglandUnited KingdomGBREurope

isolation source categories

Cat1Cat2Cat3
#Host Body Product#Gastrointestinal tract#Feces (Stool)
#Host Body-Site#Gastrointestinal tract
#Infection#Inflammation
#Infection#Patient

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
204592Risk group (German classification)
1215612Risk group (French classification)

External links

@ref: 20459

culture collection no.: DSM 27657, CIP 111237, NCTC 11344, WDCM 00138, CCUG 67711, CECT 8264

straininfo link

  • @ref: 88498
  • straininfo: 114710

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20459Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27657Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27657)
63427Curators of the CCUGhttps://www.ccug.se/strain?id=67711Culture Collection University of Gothenburg (CCUG) (CCUG 67711)
68368Automatically annotated from API 20E
68374Automatically annotated from API ID32E
88498Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID114710.1
121561Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111237Collection of Institut Pasteur (CIP 111237)