Archive BacDiveID:10.13145/bacdive24616.20230509.8.1

Strain identifier

BacDive ID: 24616

Type strain:

Species: Streptomyces burgazadensis

Strain Designation: Z1R7

Strain history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; Z1R7 <- K. Isik and S. Saricaoglu

NCBI tax ID(s): 1452742 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 21045

BacDive-ID: 24616

DSM-Number: 42126

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces burgazadensis Z1R7 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

NCBI tax id: 1452742
Matching level: species

strain history

@ref: 21045
history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; Z1R7 <- K. Isik and S. Saricaoglu

doi: 10.13145/bacdive24616.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/actinomycetota
domain: Bacteria
phylum: Actinomycetota
class: Actinomycetes
order: Kitasatosporales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces burgazadensis
full scientific name: Streptomyces burgazadensis Saricaoglu et al. 2014

@ref: 21045

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces burgazadensis

full scientific name: Streptomyces burgazadensis Saricaoglu et al. 2014

strain designation: Z1R7

type strain: yes

Morphology

multimedia

@ref: 21045
multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42126.jpg
caption: Medium 65 28°C
intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@ref	name	growth	link	composition
21045	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	yes	https://mediadive.dsmz.de/medium/65	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
21045	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	yes	https://mediadive.dsmz.de/medium/84	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
21045	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	yes	https://mediadive.dsmz.de/medium/252	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water

culture temp

@ref: 21045
growth: positive
type: growth
temperature: 28
range: mesophilic

Isolation, sampling and environmental information

isolation

@ref: 21045
sample type: soil
country: Turkey
origin.country: TUR

isolation source categories

Cat1: #Environmental
Cat2: #Terrestrial
Cat3: #Soil

taxonmaps

@ref: 69479
File name: preview.99_92595.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_38177;97_48572;98_63743;99_92595&stattab=map
Last taxonomy: Streptomyces burgazadensis subclade
16S sequence: KF793919
Sequence Identity:
Total samples: 295
soil counts: 179
aquatic counts: 19
animal counts: 20
plant counts: 77

Safety information

risk assessment

@ref: 21045
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 21045
description: Streptomyces burgazadensis strain Z1R7 16S ribosomal RNA gene, partial sequence
accession: KF793919
length: 1467
database: ena
NCBI tax ID: 1452742

GC content

@ref: 21045
GC-content: 69.4
method: fluorimetric

External links

@ref: 21045

culture collection no.: DSM 42126, KCTC 29434

straininfo link

@ref: 88460
straininfo: 398857

literature

topic: Phylogeny
Pubmed-ID: 25237147
title: Streptomyces burgazadensis sp. nov., isolated from soil.
authors: Saricaoglu S, Isik K, Veyisoglu A, Saygin H, Cetin D, Guven K, Sproer C, Klenk HP, Sahin N
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijs.0.065870-0
year: 2014
mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification, Turkey, Vitamin K 2/analogs & derivatives/chemistry
topic2: Genetics

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
21045	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-42126	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42126)
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.	MicrobeAtlas 1.0 beta	https://microbeatlas.org/
88460	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID398857.1