Strain identifier
BacDive ID: 24510
Type strain:
Species: Donghicola eburneus
Strain Designation: SW-277
Strain history: CIP <- 2007, JCM <- 2006, J.H. Yoon, KRIBB, Taejon, Korea: strain SW-277
NCBI tax ID(s): 393278 (species)
General
@ref: 21156
BacDive-ID: 24510
DSM-Number: 29127
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, coccus-shaped
description: Donghicola eburneus SW-277 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from seawater sample.
NCBI tax id
- NCBI tax id: 393278
- Matching level: species
strain history
@ref | history |
---|---|
21156 | <- JCM <- J. H. Yoon, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, South Korea; SW-277 |
67770 | J.-H. Yoon SW-277. |
67771 | <- JH Yoon, KRIBB |
118991 | CIP <- 2007, JCM <- 2006, J.H. Yoon, KRIBB, Taejon, Korea: strain SW-277 |
doi: 10.13145/bacdive24510.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodobacterales
- family: Roseobacteraceae
- genus: Donghicola
- species: Donghicola eburneus
- full scientific name: Donghicola eburneus Yoon et al. 2007
@ref: 21156
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodobacterales
family: Rhodobacteraceae
genus: Donghicola
species: Donghicola eburneus
full scientific name: Donghicola eburneus Yoon et al. 2007
strain designation: SW-277
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell width | cell shape | motility | confidence |
---|---|---|---|---|---|---|
31875 | negative | 1.3 µm | 0.7 µm | coccus-shaped | no | |
67771 | negative | |||||
69480 | negative | 99.995 | ||||
118991 | negative | rod-shaped | no |
colony morphology
- @ref: 21156
- incubation period: 1-2 days
pigmentation
- @ref: 31875
- production: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
21156 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
37752 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
118991 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
21156 | positive | growth | 30 | mesophilic |
31875 | positive | growth | 10-42 | |
31875 | positive | optimum | 26 | mesophilic |
37752 | positive | growth | 37 | mesophilic |
67770 | positive | growth | 37 | mesophilic |
67771 | positive | growth | 37 | mesophilic |
culture pH
@ref | ability | type | pH |
---|---|---|---|
31875 | positive | growth | 07-08 |
31875 | positive | optimum | 7.5 |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
31875 | aerobe |
67771 | aerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
31875 | no | |
69481 | no | 100 |
69480 | no | 99.946 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
31875 | NaCl | positive | growth | 01-12 % |
31875 | NaCl | positive | optimum | 2 % |
observation
@ref | observation |
---|---|
31875 | aggregates in chains |
67770 | quinones: Q-10 |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
31875 | 30089 | acetate | + | carbon source |
31875 | 22599 | arabinose | + | carbon source |
31875 | 17057 | cellobiose | + | carbon source |
31875 | 28757 | fructose | + | carbon source |
31875 | 28260 | galactose | + | carbon source |
31875 | 17234 | glucose | + | carbon source |
31875 | 17716 | lactose | + | carbon source |
31875 | 25115 | malate | + | carbon source |
31875 | 17306 | maltose | + | carbon source |
31875 | 29864 | mannitol | + | carbon source |
31875 | 37684 | mannose | + | carbon source |
31875 | 15361 | pyruvate | + | carbon source |
31875 | 30911 | sorbitol | + | carbon source |
31875 | 30031 | succinate | + | carbon source |
31875 | 17992 | sucrose | + | carbon source |
31875 | 17632 | nitrate | + | reduction |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | 24265 | gluconate | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 16443 | D-tagatose | - | builds acid from |
68371 | 62318 | D-lyxose | - | builds acid from |
68371 | 32528 | turanose | - | builds acid from |
68371 | 28066 | gentiobiose | - | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28087 | glycogen | - | builds acid from |
68371 | 28017 | starch | - | builds acid from |
68371 | 16634 | raffinose | - | builds acid from |
68371 | 6731 | melezitose | - | builds acid from |
68371 | 15443 | inulin | - | builds acid from |
68371 | 27082 | trehalose | - | builds acid from |
68371 | 17992 | sucrose | - | builds acid from |
68371 | 28053 | melibiose | - | builds acid from |
68371 | 17716 | lactose | - | builds acid from |
68371 | 17306 | maltose | - | builds acid from |
68371 | 17057 | cellobiose | - | builds acid from |
68371 | 17814 | salicin | - | builds acid from |
68371 | 18305 | arbutin | - | builds acid from |
68371 | 27613 | amygdalin | - | builds acid from |
68371 | 59640 | N-acetylglucosamine | - | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 16899 | D-mannitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 62345 | L-rhamnose | - | builds acid from |
68371 | 17266 | L-sorbose | - | builds acid from |
68371 | 16024 | D-mannose | - | builds acid from |
68371 | 15824 | D-fructose | - | builds acid from |
68371 | 17634 | D-glucose | - | builds acid from |
68371 | 12936 | D-galactose | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 65328 | L-xylose | - | builds acid from |
68371 | 65327 | D-xylose | - | builds acid from |
68371 | 16988 | D-ribose | - | builds acid from |
68371 | 30849 | L-arabinose | - | builds acid from |
68371 | 17108 | D-arabinose | - | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17754 | glycerol | - | builds acid from |
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | - | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | + | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | + | assimilation |
68369 | 16024 | D-mannose | + | assimilation |
68369 | 30849 | L-arabinose | + | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | + | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | + | reduction |
118991 | 17632 | nitrate | - | reduction |
118991 | 16301 | nitrite | - | reduction |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | no |
118991 | 35581 | indole | no |
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
21156 | catalase | + | 1.11.1.6 |
21156 | cytochrome-c oxidase | + | 1.9.3.1 |
31875 | catalase | + | 1.11.1.6 |
31875 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | + | 3.2.1.21 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
118991 | oxidase | + | |
118991 | catalase | + | 1.11.1.6 |
118991 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | - | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
118991 | - | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
21156 | + | - | - | - | +/- | + | - | - | + | + | + | + | - | + | + | - | - | + | + | - |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
118991 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | +/- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | +/- |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
21156 | seawater sample | East Sea, Jongdongjin | Republic of Korea | KOR | Asia |
67770 | Seawater | ||||
67771 | From seawater | Republic of Korea | KOR | Asia | |
118991 | Environment, Sea water | East Sea, Jongdongjin | Republic of Korea | KOR | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_41959.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_11109;97_13452;98_16569;99_41959&stattab=map
- Last taxonomy: Donghicola eburneus subclade
- 16S sequence: DQ667965
- Sequence Identity:
- Total samples: 1331
- soil counts: 13
- aquatic counts: 1273
- animal counts: 44
- plant counts: 1
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
21156 | 1 | Risk group (German classification) |
118991 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 21156
- description: Donghicola eburneus strain SW-277 16S ribosomal RNA gene, partial sequence
- accession: DQ667965
- length: 1416
- database: ena
- NCBI tax ID: 393278
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Donghicola eburneus strain DSM 29127 | 393278.4 | wgs | patric | 393278 |
66792 | Donghicola eburneus DSM 29127 | 2684622851 | draft | img | 393278 |
67770 | Donghicola eburneus DSM 29127 | GCA_900115865 | contig | ncbi | 393278 |
GC content
@ref | GC-content | method |
---|---|---|
31875 | 59.7 | |
21156 | 59.7 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
gram-positive | no | 99.056 | yes |
anaerobic | no | 98.147 | no |
halophile | yes | 61.364 | no |
spore-forming | no | 96.305 | yes |
glucose-util | yes | 88.235 | yes |
aerobic | yes | 86.966 | yes |
motile | yes | 68.42 | no |
flagellated | no | 71.146 | no |
thermophile | no | 97.911 | no |
glucose-ferment | no | 89.282 | yes |
External links
@ref: 21156
culture collection no.: DSM 29127, JCM 13604, KCTC 12735, CIP 109518
straininfo link
- @ref: 88367
- straininfo: 297173
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 17220445 | Donghicola eburneus gen. nov., sp. nov., isolated from seawater of the East Sea in Korea. | Yoon JH, Kang SJ, Oh TK | Int J Syst Evol Microbiol | 10.1099/ijs.0.64577-0 | 2007 | Alphaproteobacteria/chemistry/*classification/genetics/isolation & purification, Bacterial Typing Techniques, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Genes, rRNA, Genotype, Korea, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA | Genetics |
Phylogeny | 19406808 | Donghicola xiamenensis sp. nov., a marine bacterium isolated from seawater of the Taiwan Strait in China. | Tan T, Wang B, Shao Z | Int J Syst Evol Microbiol | 10.1099/ijs.0.000901-0 | 2009 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Fatty Acids/analysis, Genes, rRNA, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA, Species Specificity | Genetics |
Phylogeny | 19897619 | Pontibaca methylaminivorans gen. nov., sp. nov., a member of the family Rhodobacteraceae. | Kim KK, Lee JS, Lee KC, Oh HM, Kim SG | Int J Syst Evol Microbiol | 10.1099/ijs.0.020172-0 | 2009 | DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Geologic Sediments/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/*isolation & purification/metabolism, Sodium Chloride/metabolism | Metabolism |
Phylogeny | 24844264 | Youngimonas vesicularis gen. nov., sp. nov., of the family Rhodobacteraceae, isolated from surface seawater, reclassification of Donghicola xiamenensis Tan et al. 2009 as Pseudodonghicola xiamenensis gen. nov., comb. nov. and emended description of the genus Donghicola Yoon et al. 2007. | Hameed A, Shahina M, Lin SY, Nakayan P, Liu YC, Lai WA, Hsu YH | Int J Syst Evol Microbiol | 10.1099/ijs.0.060962-0 | 2014 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/isolation & purification, Seawater/*microbiology, Sequence Analysis, DNA, Taiwan, Ubiquinone/chemistry | Genetics |
Phylogeny | 26311168 | Donghicola tyrosinivorans sp. nov., a tyrosine-degrading bacterium isolated from seawater. | Sung HR, Lee JM, Kim M, Yun BR, Shin KS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000543 | 2015 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Rhodobacteraceae/*classification/genetics/isolation & purification, Seawater/*microbiology, Sequence Analysis, DNA, Tyrosine/metabolism, Ubiquinone/chemistry | Transcriptome |
Phylogeny | 28840796 | Monaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK. | Chernikova TN, Dallimore J, Lunsdorf H, Heipieper HJ, Golyshin PN | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002111 | 2017 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/isolation & purification, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry, Wales | Transcriptome |
Phylogeny | 29160201 | Aquicoccus porphyridii gen. nov., sp. nov., isolated from a small marine red alga, Porphyridium marinum. | Feng T, Kim KH, Jeong SE, Kim W, Jeon CO | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002498 | 2017 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Phospholipids/chemistry, *Phylogeny, Porphyridium/*microbiology, RNA, Ribosomal, 16S/genetics, Republic of Korea, Rhodobacteraceae/*classification/genetics/isolation & purification, Sequence Analysis, DNA, Ubiquinone/chemistry | Transcriptome |
Phylogeny | 33119482 | Arenibacterium halophilum gen. nov., sp. nov., a halotolerant bacterium in the family Rhodobacteraceae isolated from a coastal sand dune. | Baek J, Kim JH, Yoon JH, Lee JS, Sukhoom A, Kim W | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004534 | 2020 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics, Sand/*microbiology, Seawater/microbiology, Sequence Analysis, DNA, Species Specificity | Transcriptome |
Phylogeny | 33263508 | Donghicola mangrovi sp. nov., a member of the family Rhodobacteraceae isolated from mangrove forest in Thailand. | Charoenyingcharoen P, Kim JS, Theeragool G, Lee KC, Yukphan P, Lee JS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004570 | 2020 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/isolation & purification, Sequence Analysis, DNA, Thailand, Ubiquinone/analogs & derivatives/chemistry, *Wetlands | Transcriptome |
Reference
@id | authors | title | doi/url | catalogue | ID_cross_reference | pubmed |
---|---|---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
21156 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-29127 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29127) | |||
31875 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 28135 | 28776041 | |
37752 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/7271 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||||
68369 | Automatically annotated from API 20NE | |||||
68371 | Automatically annotated from API 50CH acid | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |||
88367 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID297173.1 | |||
118991 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20109518 | Collection of Institut Pasteur (CIP 109518) |