Strain identifier
BacDive ID: 24467
Type strain:
Species: Ensifer meliloti
Strain Designation: AK83
Strain history: <- A. Mengoni, Univ. Firenze, Italy; AK83 <- M. Roumiantseva, Russian Institute of Agricultural Microbiology, St. Petersburg-Pushkin
NCBI tax ID(s): 382 (species)
General
@ref: 20535
BacDive-ID: 24467
DSM-Number: 23913
keywords: genome sequence, Bacteria, mesophilic
description: Ensifer meliloti AK83 is a mesophilic bacterium that was isolated from root nodules of Medicago falcata.
NCBI tax id
- NCBI tax id: 382
- Matching level: species
strain history
- @ref: 20535
- history: <- A. Mengoni, Univ. Firenze, Italy; AK83 <- M. Roumiantseva, Russian Institute of Agricultural Microbiology, St. Petersburg-Pushkin
doi: 10.13145/bacdive24467.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Rhizobiaceae
- genus: Ensifer
- species: Ensifer meliloti
- full scientific name: Ensifer meliloti (Dangeard 1926) Young 2003
synonyms
@ref synonym 20215 Rhizobium meliloti 20215 Sinorhizobium meliloti
@ref: 20535
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Rhizobiaceae
genus: Ensifer
species: Ensifer meliloti
full scientific name: Ensifer meliloti (Dangeard 1926) Young 2003
strain designation: AK83
type strain: no
Morphology
colony morphology
- @ref: 20535
- incubation period: 2-3 days
Culture and growth conditions
culture medium
- @ref: 20535
- name: RHIZOBIUM MEDIUM (DSMZ Medium 98)
- growth: yes
- link: https://mediadive.dsmz.de/medium/98
- composition: Name: RHIZOBIUM MEDIUM (DSMZ Medium 98) Composition: air-dried garden soil 80.0 g/l Agar 15.0 g/l Mannitol 10.0 g/l Yeast extract 1.0 g/l Na2CO3 0.2 g/l Distilled water
culture temp
- @ref: 20535
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20535
- sample type: root nodules of Medicago falcata
- host species: Medicago falcata
- geographic location: North Aral Sea
- country: Kazakhstan
- origin.country: KAZ
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
#Host Body-Site | #Plant | #Root nodule |
Safety information
risk assessment
- @ref: 20535
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Sinorhizobium meliloti strain AK83 | 382.1070 | wgs | patric | 382 |
66792 | Sinorhizobium meliloti DSM 23913 | 2597490345 | draft | img | 693982 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
gram-positive | no | 98.033 | no |
anaerobic | no | 98.517 | no |
halophile | no | 91.496 | no |
spore-forming | no | 94.043 | no |
glucose-util | yes | 92.258 | no |
aerobic | yes | 94.414 | no |
motile | yes | 91.253 | no |
flagellated | no | 74.875 | no |
thermophile | no | 99.346 | yes |
glucose-ferment | no | 91.756 | no |
External links
@ref: 20535
culture collection no.: DSM 23913
straininfo link
- @ref: 88336
- straininfo: 398401
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
20535 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23913 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23913) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
88336 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398401.1 |