Strain identifier

BacDive ID: 24458

Type strain: Yes

Species: Actinophytocola burenkhanensis

Strain Designation: MN08-A0203

Strain history: <- NBRC; NBRC 105883 <- B. Tsetseg and K. Ando; MN08-A0203

NCBI tax ID(s): 696000 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 21208

BacDive-ID: 24458

DSM-Number: 46707

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive

description: Actinophytocola burenkhanensis MN08-A0203 is an aerobe, spore-forming, mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 696000
  • Matching level: species

strain history

  • @ref: 21208
  • history: <- NBRC; NBRC 105883 <- B. Tsetseg and K. Ando; MN08-A0203

doi: 10.13145/bacdive24458.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Actinophytocola
  • species: Actinophytocola burenkhanensis
  • full scientific name: Actinophytocola burenkhanensis Ara et al. 2011

@ref: 21208

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Actinophytocola

species: Actinophytocola burenkhanensis

full scientific name: Actinophytocola burenkhanensis Ara et al. 2011

strain designation: MN08-A0203

type strain: yes

Morphology

cell morphology

  • @ref: 29812
  • gram stain: positive
  • motility: no

pigmentation

  • @ref: 29812
  • production: yes

multimedia

  • @ref: 21208
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46707.jpg
  • caption: Medium 548 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
21208BENNETT'S AGAR (DSMZ Medium 548)yeshttps://mediadive.dsmz.de/medium/548Name: BENNETT'S AGAR (DSMZ Medium 548) Composition: Agar 15.0 g/l Glucose 10.0 g/l N-Z amine 2.0 g/l Yeast extract 1.0 g/l Beef extract 1.0 g/l Distilled water
21208GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
21208positivegrowth28mesophilic
29812positivegrowth15-30
29812positiveoptimum27.5mesophilic

culture pH

@refabilitytypepHPH range
29812positivegrowth05-09alkaliphile
29812positiveoptimum8

Physiology and metabolism

oxygen tolerance

  • @ref: 29812
  • oxygen tolerance: aerobe

spore formation

  • @ref: 29812
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
29812NaClpositivegrowth0-3 %
29812NaClpositiveoptimum1 %

observation

  • @ref: 29812
  • observation: aggregates in chains

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2981222599arabinose+carbon source
2981228260galactose+carbon source
298125291gelatin+carbon source
2981217234glucose+carbon source
2981217716lactose+carbon source
2981217306maltose+carbon source
2981237684mannose+carbon source
2981226546rhamnose+carbon source
2981233942ribose+carbon source
2981216199urea+carbon source
2981218222xylose+carbon source
298124853esculin+hydrolysis

enzymes

@refvalueactivityec
29812acid phosphatase+3.1.3.2
29812alkaline phosphatase+3.1.3.1
29812alpha-galactosidase+3.2.1.22
29812gelatinase+
29812pyrazinamidase+3.5.1.B15
29812urease+3.5.1.5

Isolation, sampling and environmental information

isolation

  • @ref: 21208
  • sample type: soil
  • geographic location: Khuvsgul Province, Burenkhan
  • country: Mongolia
  • origin.country: MNG
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 21208
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 21208
  • description: Actinophytocola burenkhanensis gene for 16S rRNA, partial sequence
  • accession: AB535095
  • length: 1458
  • database: ena
  • NCBI tax ID: 696000

GC content

  • @ref: 21208
  • GC-content: 70.6

External links

@ref: 21208

culture collection no.: DSM 46707, NBRC 105883, VTCC D9-23

straininfo link

  • @ref: 88333
  • straininfo: 403475

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny20511457Actinophytocola burenkhanensis sp. nov., isolated from Mongolian soil.Ara I, Tsetseg B, Daram D, Suto M, Ando KInt J Syst Evol Microbiol10.1099/ijs.0.021659-02010Actinomycetales/*classification/genetics/*isolation & purification/metabolism, China, DNA, Bacterial/genetics, Fatty Acids/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil MicrobiologyMetabolism
Phylogeny24944338Actinophytocola gilvus sp. nov., isolated from desert soil crusts, and emended description of the genus Actinophytocola Indananda et al. 2010.Sun HM, Zhang T, Yu LY, Lu XX, Mou XZ, Zhang YQInt J Syst Evol Microbiol10.1099/ijs.0.061051-02014Actinomycetales/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Desert Climate, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistryGenetics

Reference

@idauthorstitledoi/urlcatalogueID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21208Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46707Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46707)
29812Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172618928776041
88333Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID403475.1