Strain identifier

BacDive ID: 24360

Type strain: No

Species: Pseudomonas aeruginosa

Strain Designation: 1435, C10

Strain history: CIP <- 1995, ATCC <- L. Dicksinson <- Boots Pure Drug Co Ldt: strain C10

NCBI tax ID(s): 287 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 21109

BacDive-ID: 24360

DSM-Number: 50073

keywords: 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped, human pathogen

description: Pseudomonas aeruginosa 1435 is an obligate aerobe, mesophilic, Gram-negative human pathogen of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 287
  • Matching level: species

strain history

@refhistory
21109<- ICPB <- ATCC <- L. Dickinson <- Boots Pure Drug, Co. Ltd. C10
67770K. Komagata <-- R. Hugh 1435.
116084CIP <- 1995, ATCC <- L. Dicksinson <- Boots Pure Drug Co Ldt: strain C10

doi: 10.13145/bacdive24360.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas aeruginosa
  • full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacterium aeruginosum

@ref: 21109

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas aeruginosa

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

strain designation: 1435, C10

type strain: no

Morphology

cell morphology

  • @ref: 116084
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 116084
  • production: yes
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
21109NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
35680MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
116084CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
21109positivegrowth37mesophilic
35680positivegrowth30mesophilic
67770positivegrowth30mesophilic
116084positivegrowth30-41
116084nogrowth5psychrophilic
116084nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 116084
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin-hydrolysis
6836916199urea+hydrolysis
6836929016arginine+hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
11608416947citrate+carbon source
1160844853esculin-hydrolysis
11608417632nitrate+reduction
11608416301nitrite+reduction
11608417632nitrate+respiration

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
11608435581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6836935581indole-
11608415688acetoin-

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase-3.2.1.21
68369urease+3.5.1.5
68369arginine dihydrolase+3.5.3.6
116084oxidase+
116084beta-galactosidase-3.2.1.23
116084alcohol dehydrogenase+1.1.1.1
116084gelatinase+
116084amylase-
116084DNase+
116084caseinase+3.4.21.50
116084tween esterase+
116084lecithinase+
116084lipase+
116084lysine decarboxylase-4.1.1.18
116084ornithine decarboxylase-4.1.1.17
116084tryptophan deaminase-
116084urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
116084-+++++--+-++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
21109+--++-+-+--++-+++++-+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
116084++----------------++------+----+-+--------------+++--+--+--++-++++-+---+++++++-++++++--++++++++++++

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_42.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_36;97_37;98_40;99_42&stattab=map
  • Last taxonomy: Pseudomonas aeruginosa
  • 16S sequence: LC508775
  • Sequence Identity:
  • Total samples: 22757
  • soil counts: 1669
  • aquatic counts: 5046
  • animal counts: 14748
  • plant counts: 1294

Safety information

risk assessment

@refpathogenicity humanpathogenicity animalbiosafety levelbiosafety level comment
21109yesyes2Risk group (German classification)
1160842Risk group (French classification)

Sequence information

16S sequences

  • @ref: 67770
  • description: Pseudomonas aeruginosa JCM 14176 gene for 16S ribosomal RNA, partial sequence
  • accession: LC508775
  • length: 1458
  • database: ena
  • NCBI tax ID: 287

External links

@ref: 21109

culture collection no.: DSM 50073, ATCC 12055, ICPB 2603, JCM 14176, BCRC 16043, CIP 104467

straininfo link

  • @ref: 88284
  • straininfo: 35492

literature

  • topic: Metabolism
  • Pubmed-ID: 26117599
  • title: Direct measurement of efflux in Pseudomonas aeruginosa using an environment-sensitive fluorescent dye.
  • authors: Iyer R, Erwin AL
  • journal: Res Microbiol
  • DOI: 10.1016/j.resmic.2015.06.006
  • year: 2015
  • mesh: Anti-Bacterial Agents/metabolism, Bacterial Proteins/*metabolism, Drug Discovery/*methods, Fluorescent Dyes/metabolism, *Genes, MDR, Glucose/metabolism, Malates/metabolism, Oxazines/*metabolism, Pseudomonas aeruginosa/*metabolism

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21109Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-50073Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 50073)
35680Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/16379
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
88284Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID35492.1
116084Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104467Collection of Institut Pasteur (CIP 104467)