Strain identifier
BacDive ID: 24197
Type strain:
Species: Citricoccus sp.
Strain Designation: SB28
Strain history: <- R. Place, ETH <- S. Burri; SB28
NCBI tax ID(s): 1978372 (species)
version 8.1 (current version)
General
@ref: 20500
BacDive-ID: 24197
DSM-Number: 15393
keywords: 16S sequence, Bacteria, mesophilic
description: Citricoccus sp. SB28 is a mesophilic bacterium that was isolated from ripened cheese surface, Swiss Tilsit cheese.
NCBI tax id
- NCBI tax id: 1978372
- Matching level: species
strain history
- @ref: 20500
- history: <- R. Place, ETH <- S. Burri; SB28
doi: 10.13145/bacdive24197.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Citricoccus
- species: Citricoccus sp.
- full scientific name: Citricoccus Altenburger et al. 2002
@ref: 20500
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Micrococcaceae
genus: Citricoccus
species: Citricoccus sp.
full scientific name: Citricoccus sp.
strain designation: SB28
type strain: no
Culture and growth conditions
culture medium
- @ref: 20500
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 20500
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20500
- sample type: ripened cheese surface, Swiss Tilsit cheese
- country: Switzerland
- origin.country: CHE
- continent: Europe
isolation source categories
- Cat1: #Engineered
- Cat2: #Food production
- Cat3: #Dairy product
taxonmaps
- @ref: 69479
- File name: preview.99_84123.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_8780;97_10557;98_12948;99_84123&stattab=map
- Last taxonomy: Citricoccus lacusdiani
- 16S sequence: AJ535636
- Sequence Identity:
- Total samples: 1164
- soil counts: 241
- aquatic counts: 168
- animal counts: 693
- plant counts: 62
Sequence information
16S sequences
- @ref: 20500
- description: Arthrobacter sp. SB28 16S rRNA gene, strain SB28
- accession: AJ535636
- length: 1487
- database: ena
- NCBI tax ID: 217029
External links
@ref: 20500
culture collection no.: DSM 15393
straininfo link
- @ref: 88145
- straininfo: 396756
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
20500 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-15393 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15393) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
88145 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID396756.1 |