Strain identifier

BacDive ID: 24183

Type strain: Yes

Species: Agromyces soli

Strain Designation: MJ21

Culture col. no.: DSM 27631, JCM 16247, KCTC 19549

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 5.0 (current version):
version 4.1:
version 4.0:
version 3.0:
version 2.1:
version 2.0:
version 1.0:
version 5.0 (current version)

General

@ref: 20271

BacDive-ID: 24183

DSM-Number: 27631

keywords: Bacteria, 16S sequence, mesophilic

description: Agromyces soli MJ21 is a mesophilic bacterium that was isolated from farm soil.

strain history: <- KCTC; KCTC 19549

doi: 10.13145/bacdive24183.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Agromyces
  • species: Agromyces soli
  • full scientific name: Agromyces soli Lee et al. 2011

@ref: 20271

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Microbacteriaceae

genus: Agromyces

species: Agromyces soli

full scientific name: Agromyces soli Lee et al. 2011

strain designation: MJ21

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 20271
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf

culture temp

  • @ref: 20271
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 20271
  • murein short key: B07
  • type: B2gamma {Gly} [L-Dab] D-Glu-D-Dab

Isolation, sampling and environmental information

isolation

  • @ref: 20271
  • sample type: farm soil
  • geographic location: near Daejeon
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 20271
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20271
  • description: Agromyces soli strain MJ21 16S ribosomal RNA gene, partial sequence
  • accession: GQ241325
  • length: 1409
  • database: ena
  • NCBI tax ID: 659012

GC content

  • @ref: 20271
  • GC-content: 73.4

External links

@ref: 20271

culture collection no.: DSM 27631, JCM 16247, KCTC 19549

straininfo link

@refpassport
20218http://www.straininfo.net/strains/865996
20218http://www.straininfo.net/strains/865997

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
20271Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27631Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27631)