Strain identifier
BacDive ID: 241
Type strain:
Species: Aeromonas hydrophila
Strain Designation: NCIMB(QC) 50013, 543
Strain history: CIP <- 1976, M.Y. Popoff, Inst. Pasteur, Paris, France: strain 543 <- ATCC <- M.L. Speck, Proteus ichthyosmius
NCBI tax ID(s): 380703 (strain), 644 (species)
General
@ref: 9190
BacDive-ID: 241
DSM-Number: 30187
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, motile, human pathogen
description: Aeromonas hydrophila NCIMB 50013 is an aerobe, mesophilic, motile human pathogen that was isolated from tin of milk with a fishy odour.
NCBI tax id
NCBI tax id | Matching level |
---|---|
644 | species |
380703 | strain |
strain history
@ref | history |
---|---|
9190 | <- ATCC; ATCC 7966 <- M.L. Speck; (Proteus ichthyosmius) |
67770 | Y. Kosako 68 <-- R. Sakazaki 68 <-- ATCC 7966 <-- M. L. Speck. |
120008 | CIP <- 1976, M.Y. Popoff, Inst. Pasteur, Paris, France: strain 543 <- ATCC <- M.L. Speck, Proteus ichthyosmius |
doi: 10.13145/bacdive241.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Aeromonadales
- family: Aeromonadaceae
- genus: Aeromonas
- species: Aeromonas hydrophila
- full scientific name: Aeromonas hydrophila (Chester 1901) Stanier 1943 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus hydrophilus
@ref: 9190
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Aeromonadales
family: Aeromonadaceae
genus: Aeromonas
species: Aeromonas hydrophila subsp. hydrophila
full scientific name: Aeromonas hydrophila subsp. hydrophila (Chester 1901) Schubert 1964 emend. Huys et al. 2002
strain designation: NCIMB(QC) 50013, 543
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | yes | 98.851 | ||
69480 | 99.997 | negative | ||
120008 | yes | negative | rod-shaped |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9190 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf | |
36187 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
9190 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
120008 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 | |
120008 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
36187 | positive | growth | 30 | mesophilic |
9190 | positive | growth | 30 | mesophilic |
46130 | positive | growth | 30-37 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
120008 | positive | growth | 5-41 | |
120008 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
46130 | aerobe |
120008 | facultative anaerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.912 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
120008 | NaCl | positive | growth | 0-4 % |
120008 | NaCl | no | growth | 6 % |
120008 | NaCl | no | growth | 8 % |
120008 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | + | assimilation |
68369 | 59640 | N-acetylglucosamine | + | assimilation |
68369 | 16899 | D-mannitol | + | assimilation |
68369 | 16024 | D-mannose | + | assimilation |
68369 | 30849 | L-arabinose | + | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | + | hydrolysis |
68369 | 4853 | esculin | + | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | + | hydrolysis |
68369 | 17634 | D-glucose | + | fermentation |
68369 | 27897 | tryptophan | + | energy source |
68369 | 17632 | nitrate | + | reduction |
68368 | 30849 | L-arabinose | + | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 17992 | sucrose | + | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | + | fermentation |
68368 | 17634 | D-glucose | + | fermentation |
68368 | 5291 | gelatin | + | hydrolysis |
68368 | 27897 | tryptophan | + | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | + | degradation |
68368 | 29016 | arginine | + | hydrolysis |
120008 | 29864 | mannitol | + | fermentation |
120008 | 16947 | citrate | + | carbon source |
120008 | 17234 | glucose | + | fermentation |
120008 | 17716 | lactose | + | fermentation |
120008 | 17632 | nitrate | + | reduction |
120008 | 16301 | nitrite | + | reduction |
120008 | 15792 | malonate | - | assimilation |
120008 | 132112 | sodium thiosulfate | - | builds gas from |
120008 | 17234 | glucose | + | degradation |
120008 | 17632 | nitrate | + | respiration |
antibiotic resistance
- @ref: 120008
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | yes |
68368 | 35581 | indole | yes |
68368 | 16136 | hydrogen sulfide | no |
120008 | 35581 | indole | yes |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | + | ||
68368 | 35581 | indole | + | ||
120008 | 15688 | acetoin | + | ||
120008 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | + | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | + | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | + | |
68369 | beta-glucosidase | + | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | + | 3.5.3.6 |
68368 | cytochrome oxidase | + | 1.9.3.1 |
68368 | gelatinase | + | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | + | 4.1.1.18 |
68368 | arginine dihydrolase | + | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
120008 | oxidase | + | |
120008 | beta-galactosidase | + | 3.2.1.23 |
120008 | alcohol dehydrogenase | + | 1.1.1.1 |
120008 | gelatinase | + | |
120008 | amylase | + | |
120008 | DNase | + | |
120008 | caseinase | + | 3.4.21.50 |
120008 | catalase | + | 1.11.1.6 |
120008 | tween esterase | + | |
120008 | gamma-glutamyltransferase | - | 2.3.2.2 |
120008 | lecithinase | + | |
120008 | lipase | - | |
120008 | lysine decarboxylase | - | 4.1.1.18 |
120008 | ornithine decarboxylase | - | 4.1.1.17 |
120008 | phenylalanine ammonia-lyase | + | 4.3.1.24 |
120008 | protease | + | |
120008 | tryptophan deaminase | - | |
120008 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 46130 C12:0 5.5 12 46130 C13:0 1 13 46130 C14:0 4.5 14 46130 C15:0 4.6 15 46130 C16:0 17.8 16 46130 C17:0 2.2 17 46130 C13:0 iso 0.8 12.612 46130 C14:0 3OH/C16:1 ISO I 5.1 15.485 46130 C15:0 ISO 1 14.621 46130 C15:0 ISO 3OH 1.7 16.135 46130 C16:1 ω7c 37.3 15.819 46130 C17:0 iso 1.4 16.629 46130 C17:1 ω6c 0.6 16.862 46130 C17:1 ω8c 3.2 16.792 46130 C17:1 ω9c ISO 2.1 16.416 46130 C18:1 ω7c /12t/9t 8.7 17.824 46130 Unidentified 0.9 12.267 46130 Unidentified 1.6 16.295 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
120008 | - | + | + | + | + | + | + | - | + | - | + | - | - | + | - | + | + | + | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9190 | + | + | + | - | - | - | - | - | + | - | + | + | + | - | - | - | + | - | - | + | + |
9190 | + | + | + | - | - | - | - | - | + | - | + | + | + | - | - | - | + | - | - | + | + |
9190 | + | + | + | - | - | - | - | - | + | + | + | + | + | - | - | - | + | - | - | + | + |
9190 | + | + | + | - | - | - | - | - | + | - | + | + | + | - | - | - | + | - | - | + | + |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9190 | + | + | + | + | - | + | + | + | + | + | + | + | + | + | + | + | - | + | + | - | + |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
120008 | + | + | + | + | + | - | - | + | - | + | + | - | - | + | - | - | - | + | + | + | + | - | + | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | + | - | - | - | + | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | + | - | - | + | + | - | + | - | - | - | + | - | - | + | + | + | + | + | + | - | - | + | - |
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
9190 | tin of milk with a fishy odour |
46130 | Tin of milk with a fishy odour |
67770 | Tin of milk with a fishy odor |
120008 | Food, Tin of milk with a fishy odor |
isolation source categories
- Cat1: #Host Body Product
- Cat2: #Fluids
- Cat3: #Milk
taxonmaps
- @ref: 69479
- File name: preview.99_49.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_49&stattab=map
- Last taxonomy: Aeromonas
- 16S sequence: X60404
- Sequence Identity:
- Total samples: 5774
- soil counts: 541
- aquatic counts: 3538
- animal counts: 1487
- plant counts: 208
Safety information
risk assessment
@ref | pathogenicity human | pathogenicity animal | biosafety level | biosafety level comment |
---|---|---|---|---|
9190 | yes | yes | 2 | Risk group (German classification) |
120008 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Aeromonas sp. ATCC 7966 gene for 16S rRNA, partial sequence | AB235957 | 1018 | ena | 346636 |
20218 | Aeromonas hydrophila 16S ribosomal RNA gene, partial sequence | AY264937 | 1357 | ena | 644 |
20218 | Aeromonas hydrophila strain ATCC 7966 clone 1 16S-23S ribosomal RNA intergenic spacer, complete sequence | EF373980 | 511 | ena | 644 |
20218 | Aeromonas hydrophila strain ATCC 7966 clone 3 16S-23S ribosomal RNA intergenic spacer, complete sequence | EF373981 | 474 | ena | 644 |
20218 | Aeromonas hydrophila strain ATCC 7966 clone 4 16S-23S ribosomal RNA intergenic spacer, complete sequence | EF373982 | 474 | ena | 644 |
20218 | Aeromonas hydrophila strain ATCC 7966 clone 2 16S-23S ribosomal RNA intergenic spacer, complete sequence | EF373998 | 513 | ena | 644 |
20218 | Aeromonas hydrophila strain ATCC 7966 16S ribosomal RNA gene, partial sequence | EU254233 | 686 | ena | 644 |
20218 | Aeromonas hydrophila 16S ribosomal RNA | M59148 | 1492 | ena | 644 |
20218 | Aeromonas hydrophila 16S rRNA gene, strain ATCC 7966 | X60404 | 1503 | ena | 644 |
20218 | A.hydrophila (ATCC 7966T) gene for 16S ribosomal RNA | X74677 | 1460 | ena | 644 |
20218 | Aeromonas hydrophila subsp. hydrophila strain CECT 839 16S ribosomal RNA gene, partial sequence | JX014439 | 151 | ena | 196023 |
20218 | A.hydrophila 16S rRNA gene | X87271 | 1538 | ena | 644 |
20218 | Aeromonas hydrophila subsp. hydrophila gene for 16S rRNA, partial sequence, strain: TH050 (= JCM 1027) | AB472951 | 1415 | ena | 196023 |
20218 | Aeromonas hydrophila subsp. hydrophila gene for 16S rRNA, partial sequence, strain: JCM 1027 | AB626121 | 1467 | ena | 196023 |
9190 | Aeromonas hydrophila strain CCM 7232 16S ribosomal RNA gene, complete sequence | DQ207728 | 1542 | ena | 644 |
9190 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | CP000462 | 4744448 | ena | 380703 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | GCA_000014805 | complete | ncbi | 380703 |
66792 | Aeromonas hydrophila ATCC 7966 | GCA_018360025 | contig | ncbi | 644 |
66792 | Aeromonas hydrophila strain ATCC 7966 | 644.645 | wgs | patric | 644 |
66792 | Aeromonas hydrophila strain ATCC 7966 | 644.85 | wgs | patric | 644 |
66792 | Aeromonas hydrophila strain NCTC8049 | 644.200 | wgs | patric | 644 |
66792 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 380703.7 | complete | patric | 380703 |
66792 | Aeromonas hydrophila hydrophila ATCC 7966 | 639633004 | complete | img | 644 |
66792 | Aeromonas hydrophila NCTC 8049 | 2906233676 | draft | img | 644 |
67770 | Aeromonas hydrophila ATCC 7966 | GCA_001999685 | scaffold | ncbi | 644 |
67770 | Aeromonas hydrophila NCTC8049 | GCA_900445175 | contig | ncbi | 644 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
motile | yes | 92.485 | no |
flagellated | yes | 92.199 | no |
gram-positive | no | 98.924 | no |
anaerobic | no | 96.665 | yes |
halophile | no | 89.356 | no |
spore-forming | no | 95.766 | no |
thermophile | no | 99.595 | yes |
glucose-util | yes | 90.37 | no |
aerobic | yes | 83.444 | yes |
glucose-ferment | yes | 88.409 | yes |
External links
@ref: 9190
culture collection no.: DSM 30187, ATCC 7966, LMG 2844, NCDC 359-60, NCMB 86, NCTC 8049, WDCM 00063, CCUG 14551, CIP 76.14, JCM 1027, BCRC 13018, CCM 7232, CDC 359-60, CECT 839, HAMBI 1847, IAM 12337, IAM 12460, KCTC 2358, LMG 12156, LMG 13439, NCAIM B.01923, NCIMB 9240
straininfo link
- @ref: 69923
- straininfo: 92094
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Cultivation | 1517173 | Effect of culture age, pre-incubation at low temperature and pH on the thermal resistance of Aeromonas hydrophila. | Condon S, Garcia ML, Otero A, Sala FJ | J Appl Bacteriol | 10.1111/j.1365-2672.1992.tb01842.x | 1992 | Aeromonas hydrophila/*growth & development, Colony Count, Microbial, Culture Media, *Hot Temperature, Hydrogen-Ion Concentration, Temperature, Time Factors | Stress |
Enzymology | 1778417 | Specific binding of lactoferrin to Aeromonas hydrophila. | Kishore AR, Erdei J, Naidu SS, Falsen E, Forsgren A, Naidu AS | FEMS Microbiol Lett | 10.1016/0378-1097(91)90454-i | 1991 | Aeromonas hydrophila/*metabolism, Binding Sites, Blotting, Western, Carrier Proteins/isolation & purification/*metabolism, Cell Membrane/metabolism, Electrophoresis, Polyacrylamide Gel, Iodine Radioisotopes, Kinetics, Lactoferrin/*metabolism | Metabolism |
Enzymology | 1800890 | Nucleotide sequence and expression of an extracellular hemolysin gene of Aeromonas hydrophila. | Hirono I, Aoki T | Microb Pathog | 10.1016/0882-4010(91)90049-g | 1991 | Aeromonas hydrophila/*genetics, Amino Acid Sequence, Bacterial Toxins/*genetics, Base Sequence, Cloning, Molecular, Escherichia coli/genetics, Genetic Variation, Molecular Sequence Data, Pore Forming Cytotoxic Proteins, Recombinant Proteins, Regulatory Sequences, Nucleic Acid, Restriction Mapping | Genetics |
Pathogenicity | 7547145 | Lactic acid inhibition of the growth of spoilage bacteria and cold tolerant pathogens on pork. | Greer GG, Dilts BD | Int J Food Microbiol | 10.1016/0168-1605(94)00088-n | 1995 | Adipose Tissue/microbiology, Aeromonas hydrophila/drug effects/growth & development, Animals, Bacteria/*drug effects/growth & development, *Cold Temperature, Hydrogen-Ion Concentration/drug effects, Lactates/*pharmacology, Lactic Acid, Listeria monocytogenes/drug effects/growth & development, Meat/*microbiology, Pseudomonas/drug effects/growth & development, Swine, Time Factors, Yersinia enterocolitica/drug effects/growth & development | |
9477259 | Reduction of diverse electron acceptors by aeromonas hydrophila | Knight V V, Blakemore R | Arch Microbiol | 10.1007/s002030050567 | 1998 | |||
Metabolism | 9493366 | Inactivation of two haemolytic toxin genes in Aeromonas hydrophila attenuates virulence in a suckling mouse model. | Wong CYF, Heuzenroeder MW, Flower RLP | Microbiology (Reading) | 10.1099/00221287-144-2-291 | 1998 | Aeromonas hydrophila/*genetics/*metabolism/pathogenicity, Alleles, Animals, Bacterial Proteins, Bacterial Toxins/*genetics/*metabolism, Biological Assay, Cells, Cultured, Cloning, Molecular, DNA, Bacterial/analysis/genetics, Gene Expression, Gram-Negative Bacterial Infections/genetics/*microbiology, Hemolysin Proteins/genetics, Mice, Molecular Sequence Data, Mutagenesis, Insertional, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Pore Forming Cytotoxic Proteins, Sequence Analysis, DNA, Virulence | Enzymology |
Enzymology | 11700360 | Occurrence of two superoxide dismutases in Aeromonas hydrophila: molecular cloning and differential expression of the sodA and sodB genes. | Leclere V, Chotteau-Lelievre A, Gancel F, Imbert M, Blondeau R | Microbiology (Reading) | 10.1099/00221287-147-11-3105 | 2001 | Aeromonas/*enzymology/genetics, Bacterial Proteins/*genetics/isolation & purification/metabolism, Cloning, Molecular, DNA, Bacterial/chemistry/genetics, Gene Expression Regulation, Bacterial/drug effects, Gene Expression Regulation, Enzymologic/drug effects, Iron/metabolism, Isoenzymes/genetics, Molecular Sequence Data, Paraquat/pharmacology, Superoxide Dismutase/*genetics/isolation & purification/metabolism | Metabolism |
Pathogenicity | 11972699 | Production of a monoclonal antibody against Aeromonas hydrophila and its application to bacterial identification. | Delamare AP, Echeverrigaray S, Duarte KR, Gomes LH, Costa SO | J Appl Microbiol | 10.1046/j.1365-2672.2002.01603.x | 2002 | Aeromonas hydrophila/*classification/*immunology, Animals, Antibodies, Bacterial/biosynthesis/immunology, *Antibodies, Monoclonal/biosynthesis/immunology, Antibody Specificity, Enzyme-Linked Immunosorbent Assay, Feces/microbiology, Gram-Negative Bacterial Infections/*diagnosis/microbiology, Humans, Hybridomas, Mice | Biotechnology |
Phylogeny | 12799011 | A novel electrochemically active and Fe(III)-reducing bacterium phylogenetically related to Aeromonas hydrophila, isolated from a microbial fuel cell. | Pham CA, Jung SJ, Phung NT, Lee J, Chang IS, Kim BH, Yi H, Chun J | FEMS Microbiol Lett | 10.1016/S0378-1097(03)00354-9 | 2003 | Aeromonas hydrophila/*classification/*metabolism/ultrastructure, Electrochemistry/*methods, Electrodes/microbiology, Electrons, Ferric Compounds/*metabolism, Microscopy, Electron, Scanning, Nitrates/metabolism, Phylogeny, Sulfates/metabolism | Metabolism |
Enzymology | 15012822 | Functional significance of a periplasmic Mn-superoxide dismutase from Aeromonas hydrophila. | Leclere V, Bechet M, Blondeau R | J Appl Microbiol | 10.1111/j.1365-2672.2004.02231.x | 2004 | Aeromonas hydrophila/*enzymology, Mutagenesis, Insertional, Oxidative Stress, Superoxide Dismutase/genetics/*physiology | |
Cultivation | 15281936 | Maintenance of pathogenicity during entry into and resuscitation from viable but nonculturable state in Aeromonas hydrophila exposed to natural seawater at low temperature. | Maalej S, Gdoura R, Dukan S, Hammami A, Bouain A | J Appl Microbiol | 10.1111/j.1365-2672.2004.02336.x | 2004 | Aeromonas hydrophila/*pathogenicity/physiology, Bacterial Adhesion/physiology, *Cold Temperature, Colony Count, Microbial, Culture Media, Erythrocytes/microbiology, Hemolysin Proteins/analysis, Hemolysis, Hot Temperature, Humans, Seawater/*microbiology | Stress |
Enzymology | 16212035 | Purification of bovine milk lactoperoxidase and investigation of antibacterial properties at different thiocyanate mediated. | Uguz MT, Ozdemir H | Prikl Biokhim Mikrobiol | 2005 | Animals, Anti-Bacterial Agents/*chemistry/pharmacology, Cattle, Chromatography, Gel, Chromatography, Ion Exchange, Electrophoresis, Polyacrylamide Gel, Hydrogen Peroxide/chemistry, Lactoperoxidase/*isolation & purification/metabolism/pharmacology, Microbial Sensitivity Tests, Milk/*enzymology, Thiocyanates/*chemistry | Phylogeny | |
Genetics | 16980456 | Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades. | Seshadri R, Joseph SW, Chopra AK, Sha J, Shaw J, Graf J, Haft D, Wu M, Ren Q, Rosovitz MJ, Madupu R, Tallon L, Kim M, Jin S, Vuong H, Stine OC, Ali A, Horneman AJ, Heidelberg JF | J Bacteriol | 10.1128/JB.00621-06 | 2006 | Aeromonas hydrophila/chemistry/enzymology/*genetics, Arsenates/metabolism, Bacterial Proteins/genetics/metabolism, Carrier Proteins/genetics, Fimbriae, Bacterial/genetics, *Genome, Bacterial, Humans, Molecular Sequence Data, Oxidoreductases/genetics/metabolism, Phylogeny, Pyrazoles/metabolism, Sulfates/metabolism, Virulence/genetics, Virulence Factors/genetics | Metabolism |
Biotechnology | 17140685 | An investigation of the Gamma hypothesis: a predictive modelling study of the effect of combined inhibitors (salt, pH and weak acids) on the growth of Aeromonas hydrophila. | Lambert RJ, Bidlas E | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2006.10.011 | 2006 | Acids/*pharmacology, Aeromonas hydrophila/*drug effects/*growth & development, Colony Count, Microbial, Dose-Response Relationship, Drug, Drug Synergism, Food Microbiology, *Hydrogen-Ion Concentration, Kinetics, *Models, Biological, Predictive Value of Tests, Salts/*pharmacology, Time Factors | Enzymology |
Enzymology | 17725618 | Identification of a new hemolysin from diarrheal isolate SSU of Aeromonas hydrophila. | Erova TE, Sha J, Horneman AJ, Borchardt MA, Khajanchi BK, Fadl AA, Chopra AK | FEMS Microbiol Lett | 10.1111/j.1574-6968.2007.00895.x | 2007 | Aeromonas hydrophila/genetics/*isolation & purification/metabolism, Amino Acid Sequence, Bacterial Proteins/chemistry/genetics/metabolism, Base Sequence, Cloning, Molecular, DNA Fingerprinting/methods, Diarrhea/*microbiology, Gram-Negative Bacterial Infections/microbiology, *Hemolysin Proteins/chemistry/genetics/metabolism, Hemolysis, Humans, Molecular Sequence Data, Sequence Analysis, DNA | Metabolism |
Enzymology | 18310345 | Molecular analysis of three Aeromonas hydrophila AH-3 (serotype O34) lipopolysaccharide core biosynthesis gene clusters. | Jimenez N, Canals R, Lacasta A, Kondakova AN, Lindner B, Knirel YA, Merino S, Regue M, Tomas JM | J Bacteriol | 10.1128/JB.01874-07 | 2008 | Aeromonas hydrophila/*genetics/metabolism, Carbohydrate Sequence, Cloning, Molecular, Gene Order, *Genes, Bacterial, Genetic Complementation Test, Glycosyltransferases/genetics, Molecular Sequence Data, Molecular Structure, Multigene Family, Mutation, O Antigens/*biosynthesis/chemistry/genetics, Sequence Analysis, DNA | Genetics |
Enzymology | 18344363 | Cold shock exoribonuclease R (VacB) is involved in Aeromonas hydrophila pathogenesis. | Erova TE, Kosykh VG, Fadl AA, Sha J, Horneman AJ, Chopra AK | J Bacteriol | 10.1128/JB.00075-08 | 2008 | Aeromonas hydrophila/enzymology/isolation & purification/*pathogenicity, Amino Acid Sequence, Animals, *Cold Temperature, Exoribonucleases/genetics/*physiology, Gene Expression Regulation, Bacterial/genetics, Macrophages/microbiology, Molecular Sequence Data, Virulence/*genetics | Genetics |
Pathogenicity | 19032165 | In silico identification of putative drug targets from different metabolic pathways of Aeromonas hydrophila. | Sharma V, Gupta P, Dixit A | In Silico Biol | 2008080026 | 2008 | Aeromonas hydrophila/*genetics/*metabolism, Animals, Computational Biology/*methods, *Drug Design, Genes, Bacterial/*drug effects, Genes, Essential, Genome, Bacterial, Genomics/methods, Gram-Negative Bacterial Infections/prevention & control, Humans, Metabolic Networks and Pathways/drug effects/genetics | Genetics |
Biotechnology | 21034267 | Biofilm formation by Aeromonas hydrophila on green-leafy vegetables: cabbage and lettuce. | Elhariry HM | Foodborne Pathog Dis | 10.1089/fpd.2010.0642 | 2010 | Aeromonas hydrophila/genetics/isolation & purification/*physiology, Bacterial Adhesion/physiology, Base Sequence, Biofilms/*growth & development, Brassica/*microbiology, *Food Microbiology, Hydrophobic and Hydrophilic Interactions, Lettuce/*microbiology, Molecular Sequence Data, Plant Leaves/microbiology, Surface Properties, Water Supply | Genetics |
Metabolism | 21737499 | Aeromonas hydrophila motY is essential for polar flagellum function, and requires coordinate expression of motX and Pom proteins. | Molero R, Wilhelms M, Infanzon B, Tomas JM, Merino S | Microbiology (Reading) | 10.1099/mic.0.049544-0 | 2011 | Aeromonas hydrophila/chemistry/genetics/*metabolism, Amino Acid Sequence, Bacterial Outer Membrane Proteins/chemistry/*genetics/*metabolism, Bacterial Proteins/chemistry/*genetics/*metabolism, Base Sequence, Flagella/chemistry/genetics/*physiology, *Gene Expression Regulation, Bacterial, Membrane Proteins/chemistry/*genetics/*metabolism, Molecular Sequence Data, Protein Binding, Sequence Alignment | Genetics |
21888227 | In-vitro antimicrobial activity and synergistic/antagonistic effect of interactions between antibiotics and some spice essential oils. | Toroglu S | J Environ Biol | 2011 | Anti-Bacterial Agents/*pharmacology, Drug Synergism, Microbial Sensitivity Tests, Oils, Volatile/*pharmacology, *Spices | |||
Metabolism | 22814176 | Actin cross-linking domain of Aeromonas hydrophila repeat in toxin A (RtxA) induces host cell rounding and apoptosis. | Suarez G, Khajanchi BK, Sierra JC, Erova TE, Sha J, Chopra AK | Gene | 10.1016/j.gene.2012.07.012 | 2012 | Actins/*chemistry, Aeromonas hydrophila/*metabolism, Animals, *Apoptosis, Bacterial Toxins/chemistry/*metabolism, Base Sequence, Cross-Linking Reagents/pharmacology, Escherichia coli/metabolism, Female, Green Fluorescent Proteins/metabolism, HeLa Cells, Humans, Mice, Models, Genetic, Molecular Sequence Data, Operon, Recombinant Proteins/metabolism | Pathogenicity |
Metabolism | 23391908 | Characterization of a gene encoding the outer membrane receptor for ferric enterobactin in Aeromonas hydrophila ATCC 7966(T). | Funahashi T, Tanabe T, Miyamoto K, Tsujibo H, Maki J, Yamamoto S | Biosci Biotechnol Biochem | 10.1271/bbb.120774 | 2013 | Aeromonas hydrophila/*genetics/metabolism, Amino Acid Sequence, Bacterial Outer Membrane Proteins/*genetics/metabolism, Bacterial Proteins/*genetics/metabolism, Base Sequence, Biological Transport, Enterobactin/*metabolism, *Gene Expression Regulation, Bacterial, Genetic Complementation Test, Iron/*metabolism, Membrane Proteins/genetics/metabolism, Molecular Sequence Data, Oxidoreductases Acting on CH-CH Group Donors/genetics/metabolism, Promoter Regions, Genetic, Receptors, Cell Surface/*genetics/metabolism, Sequence Homology, Amino Acid, Vibrio cholerae/genetics/metabolism, Vibrio parahaemolyticus/genetics/metabolism | Genetics |
Genetics | 23405367 | Draft Genome Sequence of a Clinical Isolate, Aeromonas hydrophila SNUFPC-A8, from a Moribund Cherry Salmon (Oncorhynchus masou masou). | Han JE, Kim JH, Choresca C, Shin SP, Jun JW, Park SC | Genome Announc | 10.1128/genomeA.00133-12 | 2013 | ||
Genetics | 23611906 | Characterization of Aeromonas hydrophila wound pathotypes by comparative genomic and functional analyses of virulence genes. | Grim CJ, Kozlova EV, Sha J, Fitts EC, van Lier CJ, Kirtley ML, Joseph SJ, Read TD, Burd EM, Tall BD, Joseph SW, Horneman AJ, Chopra AK, Shak JR | mBio | 10.1128/mBio.00064-13 | 2013 | Aeromonas hydrophila/cytology/*genetics/*isolation & purification/pathogenicity, Animals, Disease Models, Animal, Female, Flagella/physiology, Genome, Bacterial, Genotype, Gram-Negative Bacterial Infections/*microbiology, Humans, Locomotion, Mice, Microscopy, Electron, Molecular Sequence Data, Sequence Analysis, DNA, Virulence Factors/*genetics, Wound Infection/*microbiology | Pathogenicity |
Genetics | 24000047 | Genomic study of polyhydroxyalkanoates producing Aeromonas hydrophila 4AK4. | Gao X, Jian J, Li WJ, Yang YC, Shen XW, Sun ZR, Wu Q, Chen GQ | Appl Microbiol Biotechnol | 10.1007/s00253-013-5189-y | 2013 | Aeromonas hydrophila/*genetics/*metabolism, Bacterial Proteins/*genetics/metabolism, *Genome, Bacterial, Genomics, Polyhydroxyalkanoates/*biosynthesis | Metabolism |
Genetics | 24859591 | Flagellar motility contributes to the invasion and survival of Aeromonas hydrophila in Anguilla japonica macrophages. | Qin Y, Lin G, Chen W, Huang B, Huang W, Yan Q | Fish Shellfish Immunol | 10.1016/j.fsi.2014.05.016 | 2014 | Aeromonas hydrophila/genetics/*physiology, Analysis of Variance, *Anguilla, Animals, Bacterial Proteins/genetics, Base Sequence, Blotting, Southern, DNA Primers/genetics, DNA Transposable Elements/genetics, Escherichia coli, Fish Diseases/*immunology/*microbiology, Flagella/physiology, Gram-Negative Bacterial Infections/*veterinary, Host-Pathogen Interactions, Macrophages/immunology/*microbiology, Molecular Sequence Data, Mutagenesis, Open Reading Frames/genetics, Sequence Analysis, DNA | Transcriptome |
Phylogeny | 24994773 | Streptomyces pluripotens sp. nov., a bacteriocin-producing streptomycete that inhibits meticillin-resistant Staphylococcus aureus. | Lee LH, Zainal N, Azman AS, Eng SK, Ab Mutalib NS, Yin WF, Chan KG | Int J Syst Evol Microbiol | 10.1099/ijs.0.065045-0 | 2014 | *Antibiosis, Avicennia, Bacterial Typing Techniques, Bacteriocins/*biosynthesis, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Malaysia, Methicillin-Resistant Staphylococcus aureus, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification/*metabolism, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
Metabolism | 25273145 | Identification and characterization of Aeromonas hydrophila genes encoding the outer membrane receptor of ferrioxamine B and an AraC-type transcriptional regulator. | Funahashi T, Tanabe T, Maki J, Miyamoto K, Tsujibo H, Yamamoto S | Biosci Biotechnol Biochem | 10.1080/09168451.2014.932669 | 2014 | Aeromonas hydrophila/*genetics/*metabolism, Amino Acid Sequence, AraC Transcription Factor/chemistry/*genetics/*metabolism, Bacterial Outer Membrane Proteins/*genetics/*metabolism, Deferoxamine/*metabolism, Energy Metabolism, Ferric Compounds/*metabolism, Iron/metabolism, Multigene Family/genetics, Operon/genetics, Phenotype, Sequence Deletion, Substrate Specificity, Transcription, Genetic | Phenotype |
Metabolism | 25443157 | Aeromonas piscicola AH-3 expresses an extracellular collagenase with cytotoxic properties. | Duarte AS, Cavaleiro E, Pereira C, Merino S, Esteves AC, Duarte EP, Tomas JM, Correia AC | Lett Appl Microbiol | 10.1111/lam.12373 | 2014 | Aeromonas hydrophila/*enzymology/genetics/metabolism, Animals, Base Sequence, Cell Line, Chlorocebus aethiops, Clostridium/enzymology/metabolism, Collagen/*metabolism, DNA, Bacterial/genetics, Microbial Collagenase/*genetics/*metabolism, Molecular Sequence Data, Protein Structure, Tertiary, Sequence Analysis, DNA, Vero Cells | Enzymology |
Metabolism | 25881868 | MinD plays an important role in Aeromonas hydrophila adherence to Anguilla japonica mucus. | Huang L, Qin Y, Yan Q, Lin G, Huang L, Huang B, Huang W | Gene | 10.1016/j.gene.2015.04.031 | 2015 | Aeromonas hydrophila/*genetics, Amino Acid Sequence, Anguilla/*microbiology, Animals, Bacterial Proteins/*genetics/*metabolism, Cloning, Molecular/methods, DNA Transposable Elements/genetics, Escherichia coli/genetics, Gene Library, Mucus/*metabolism, Mutagenesis/genetics, Mutation/genetics, Open Reading Frames/genetics, Virulence/*genetics | Enzymology |
Pathogenicity | 25925153 | Photodynamic Inactivation Mediated by Erythrosine and its Derivatives on Foodborne Pathogens and Spoilage Bacteria. | Yassunaka NN, Freitas CF, Rabello BR, Santos PR, Caetano W, Hioka N, Nakamura TU, Abreu Filho BA, Graton Mikcha JM | Curr Microbiol | 10.1007/s00284-015-0827-5 | 2015 | Bacteria/*drug effects/growth & development/*radiation effects, Erythrosine/chemistry/*pharmacology, Food Contamination/analysis, Food Microbiology, Light, Microbial Viability/drug effects/radiation effects, Photosensitizing Agents/chemistry/*pharmacology | Biotechnology |
Genetics | 26014286 | Novel insights into the pathogenicity of epidemic Aeromonas hydrophila ST251 clones from comparative genomics. | Pang M, Jiang J, Xie X, Wu Y, Dong Y, Kwok AH, Zhang W, Yao H, Lu C, Leung FC, Liu Y | Sci Rep | 10.1038/srep09833 | 2015 | Aeromonas hydrophila/classification/genetics/*pathogenicity, Animals, Comparative Genomic Hybridization, Fish Diseases/microbiology/pathology, Fishes, Flagella/genetics, Fucose/metabolism, *Genome, Bacterial, Inositol/metabolism, Multigene Family, N-Acetylneuraminic Acid/metabolism, O Antigens/genetics, Phylogeny, Prophages/genetics, Virulence Factors/genetics | Phylogeny |
Genetics | 26452302 | Genome sequence of Streptomyces pluripotens MUSC 135(T) exhibiting antibacterial and antioxidant activity. | Ser HL, Tan WS, Ab Mutalib NS, Cheng HJ, Yin WF, Chan KG, Lee LH | Mar Genomics | 10.1016/j.margen.2015.09.010 | 2015 | Aeromonas hydrophila/drug effects, Anti-Bacterial Agents/metabolism/*pharmacology, Antioxidants/metabolism/*pharmacology, Gene Expression Regulation, Bacterial/*physiology, *Genome, Bacterial, Methicillin-Resistant Staphylococcus aureus/drug effects, Salmonella typhi/drug effects, Streptomyces/genetics | Pathogenicity |
Phylogeny | 26630331 | Aeromonas rivipollensis sp. nov., a novel species isolated from aquatic samples. | Marti E, Balcazar JL | J Basic Microbiol | 10.1002/jobm.201500264 | 2015 | Aeromonas/*classification/genetics/*isolation & purification, Aeromonas hydrophila/genetics/isolation & purification, Bacterial Typing Techniques, DNA, Bacterial/genetics/isolation & purification, Genes, Bacterial, Genotyping Techniques, Multilocus Sequence Typing, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics/isolation & purification, Rivers/microbiology, Spain, Species Specificity, *Water Microbiology | Enzymology |
Stress | 27163835 | Expression of virulence and stress response genes in Aeromonas hydrophila under various stress conditions. | Nagar V, Bandekar JR, Shashidhar R | J Basic Microbiol | 10.1002/jobm.201600107 | 2016 | Aeromonas hydrophila/genetics/*pathogenicity, Bacterial Proteins/*biosynthesis, Cold-Shock Response, DNA-Directed RNA Polymerases/*biosynthesis, Gene Expression Profiling, Heat-Shock Proteins/*biosynthesis, Sigma Factor/*biosynthesis, Starvation, *Stress, Physiological, Virulence Factors/genetics | |
Metabolism | 27173333 | Hemerythrin is required for Aeromonas hydraphlia to survive in the macrophages of Anguilla japonica. | Zeng WB, Chen WB, Yan QP, Lin GF, Qin YX | Genet Mol Res | 10.4238/gmr.15028074 | 2016 | Aeromonas hydrophila/genetics/*metabolism, Amino Acid Sequence, Anguilla/metabolism/*microbiology, Animals, Bacterial Proteins/genetics/metabolism, Cell Movement/physiology, Hemerythrin/genetics/*metabolism, Macrophages/metabolism/*microbiology, Virulence | |
Metabolism | 28127946 | Ribose operon repressor (RbsR) contributes to the adhesion of Aeromonas hydrophila to Anguilla japonica mucus. | Lin G, Chen W, Su Y, Qin Y, Huang L, Yan Q | Microbiologyopen | 10.1002/mbo3.451 | 2017 | Aeromonas hydrophila/genetics/*physiology, Anguilla/metabolism/*microbiology, Animals, *Bacterial Adhesion, Biosynthetic Pathways/genetics, DNA Transposable Elements, Microbial Viability, Mucus/metabolism/*microbiology, Mutagenesis, Insertional, *Operon, Repressor Proteins/*metabolism, Ribose/*biosynthesis | |
Metabolism | 28371510 | AcuC, a histone deacetylase, contributes to the pathogenicity of Aeromonas hydrophila. | Jiang Q, Chen W, Qin Y, Huang L, Xu X, Zhao L, Yan Q | Microbiologyopen | 10.1002/mbo3.468 | 2017 | Aeromonas hydrophila/*enzymology/genetics/*pathogenicity, Animals, Bacterial Proteins/genetics/metabolism, DNA Transposable Elements, Gene Knockout Techniques, Gene Regulatory Networks, Genetic Complementation Test, Histone Deacetylases/genetics/*metabolism, Microbial Viability, Mutagenesis, Insertional, Open Reading Frames, Phagocytes/immunology/*microbiology, Regulon, Tilapia/immunology/*microbiology, Virulence, Virulence Factors/genetics/metabolism | Enzymology |
Metabolism | 30266730 | Divergent Nrf Family Proteins and MtrCAB Homologs Facilitate Extracellular Electron Transfer in Aeromonas hydrophila. | Conley BE, Intile PJ, Bond DR, Gralnick JA | Appl Environ Microbiol | 10.1128/AEM.02134-18 | 2018 | Aeromonas hydrophila/classification/genetics/*metabolism, Bacterial Proteins/genetics/*metabolism, Cell Membrane/genetics/metabolism, Electron Transport, Electrons, Gene Expression Regulation, Bacterial, Manganese Compounds/metabolism, Metals/metabolism, *Multigene Family, Oxidation-Reduction, Oxides/metabolism, Periplasm/genetics/metabolism, Phylogeny, Shewanella/classification/genetics/metabolism | Phylogeny |
Metabolism | 30304991 | Silencing of cyt-c4 led to decrease of biofilm formation in Aeromonas hydrophila. | Li H, Qin Y, Mao X, Zheng W, Luo G, Xu X, Zheng J | Biosci Biotechnol Biochem | 10.1080/09168451.2018.1528543 | 2018 | Aeromonas hydrophila/*genetics/*metabolism/pathogenicity, Amino Acid Sequence, Aquaculture, Bacterial Adhesion/genetics, Base Sequence, *Biofilms, Cytochrome c Group/*genetics, DNA Transposable Elements, Drug Resistance, Bacterial/genetics, *Gene Silencing, *Genes, Bacterial, Mutagenesis, Insertional, Open Reading Frames, RNA Interference, Virulence | |
Pathogenicity | 30317865 | Antimicrobial activity of spices essential oils and its effectiveness on mature biofilms of human pathogens. | Condo C, Anacarso I, Sabia C, Iseppi R, Anfelli I, Forti L, de Niederhausern S, Bondi M, Messi P | Nat Prod Res | 10.1080/14786419.2018.1490904 | 2018 | Anti-Bacterial Agents/isolation & purification/*pharmacology, Biofilms/*drug effects, Candida albicans/drug effects, Cinnamomum zeylanicum/chemistry, Cuminum/chemistry, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Humans, Microbial Sensitivity Tests, Oils, Volatile/*pharmacology/therapeutic use, Pseudomonas aeruginosa/drug effects, *Spices, Syzygium/chemistry | Enzymology |
Metabolism | 30352804 | Integrated Succinylome and Metabolome Profiling Reveals Crucial Role of S-Ribosylhomocysteine Lyase in Quorum Sensing and Metabolism of Aeromonas hydrophila. | Yao Z, Guo Z, Wang Y, Li W, Fu Y, Lin Y, Lin W, Lin X | Mol Cell Proteomics | 10.1074/mcp.RA118.001035 | 2018 | Aeromonas hydrophila/*physiology, Bacterial Proteins/chemistry/genetics/*metabolism, Carbon-Sulfur Lyases/chemistry/genetics/*metabolism, Chromatography, Liquid, Gene Ontology, Homoserine/analogs & derivatives/metabolism, Lactones/metabolism, Lysine/*chemistry/genetics, Metabolome, Metabolomics/*methods, Mutagenesis, Site-Directed, Protein Processing, Post-Translational, *Quorum Sensing, Tandem Mass Spectrometry | Proteome |
Metabolism | 30597314 | SWATH based quantitative proteomics analysis reveals Hfq2 play an important role on pleiotropic physiological functions in Aeromonas hydrophila. | Cai Q, Wang G, Li Z, Zhang L, Fu Y, Yang X, Lin W, Lin X | J Proteomics | 10.1016/j.jprot.2018.12.030 | 2018 | Aeromonas hydrophila/genetics/*metabolism, Bacterial Proteins/genetics/*metabolism, Gene Knockout Techniques, *Metabolic Networks and Pathways, *Proteomics, RNA-Binding Proteins/genetics/*metabolism | |
Metabolism | 30783060 | Production of Polyhydroxyalkanoates Copolymers by Recombinant Pseudomonas in Plasmid- and Antibiotic-Free Cultures. | Oliveira-Filho ER, Guaman LP, Mendonca TT, Long PF, Taciro MK, Gomez JGC, Silva LF | J Mol Microbiol Biotechnol | 10.1159/000495752 | 2019 | 3-Hydroxybutyric Acid/metabolism, Acyltransferases/genetics, Aeromonas/genetics, Aeromonas hydrophila/genetics, Anti-Bacterial Agents, Bacterial Proteins/genetics/metabolism, Caproates/metabolism, Chromosomes, Bacterial, Culture Media/chemistry, Cupriavidus necator/genetics, Decanoic Acids/metabolism, Glucose/metabolism, Mutation, Plasmids/*genetics, Polyhydroxyalkanoates/*biosynthesis/*genetics, Pseudomonas/enzymology/*genetics/*metabolism, Transformation, Bacterial | Biotechnology |
31084093 | Construction of and Comparisons Between Response Surface Models for Aeromonas hydrophila ATCC 7966 and a Food Isolate Under Aerobic Conditions. | Hudson JA | J Food Prot | 10.4315/0362-028X-55.12.968 | 1992 | |||
Metabolism | 31121519 | Formation mechanism of organo-chromium (III) complexes from bioreduction of chromium (VI) by Aeromonas hydrophila. | Huang XN, Min D, Liu DF, Cheng L, Qian C, Li WW, Yu HQ | Environ Int | 10.1016/j.envint.2019.05.016 | 2019 | Aeromonas hydrophila/*metabolism, Biodegradation, Environmental, Chromium Compounds/*metabolism, Oxidation-Reduction | |
Biotechnology | 31494436 | Polyhydroxy butyrate production by Acinetobacter junii BP25, Aeromonas hydrophila ATCC 7966, and their co-culture using a feast and famine strategy. | Anburajan P, Naresh Kumar A, Sabapathy PC, Kim GB, Cayetano RD, Yoon JJ, Kumar G, Kim SH | Bioresour Technol | 10.1016/j.biortech.2019.122062 | 2019 | *Acinetobacter, Aeromonas hydrophila, Bioreactors, *Butyrates, Coculture Techniques, Hydroxybutyrates, Polyesters, Spectroscopy, Fourier Transform Infrared | |
Phylogeny | 32752245 | Expression of a Shiga-Like Toxin during Plastic Colonization by Two Multidrug-Resistant Bacteria, Aeromonas hydrophila RIT668 and Citrobacter freundii RIT669, Isolated from Endangered Turtles (Clemmys guttata). | Thomas SG, Glover MA, Parthasarathy A, Wong NH, Shipman PA, Hudson AO | Microorganisms | 10.3390/microorganisms8081172 | 2020 | Pathogenicity | |
33817062 | Secondary Metabolites of Antarctic Fungi Antagonistic to Aquatic Pathogenic Bacteria. | Zhao H, Cai C, Liu X, Jiao B, Chen B, Cai M, He P | Open Life Sci | 10.1515/biol-2018-0002 | 2018 | |||
34073161 | Attenuation of Aeromonas hydrophila Infection in Carassius auratus by YtnP, a N-acyl Homoserine Lactonase from Bacillus licheniformis T-1. | Peng M, Tong W, Zhao Z, Xiao L, Wang Z, Liu X, He X, Song Z | Antibiotics (Basel) | 10.3390/antibiotics10060631 | 2021 | |||
34204770 | Bacteriophages with Potential to Inactivate Aeromonas hydrophila in Cockles: In Vitro and In Vivo Preliminary Studies. | Duarte J, Pereira C, Costa P, Almeida A | Antibiotics (Basel) | 10.3390/antibiotics10060710 | 2021 | |||
Pathogenicity | 34609911 | Overexpression of Resistance-Nodulation-Division Efflux Pump Genes Contributes to Multidrug Resistance in Aeromonas hydrophila Clinical Isolates. | Lo CC, Liao WY, Chou MC, Wu YY, Yeh TH, Lo HR | Microb Drug Resist | 10.1089/mdr.2021.0084 | 2021 | Aeromonas hydrophila/drug effects/*genetics, Anti-Bacterial Agents/*pharmacology, Drug Resistance, Multiple, Bacterial/*drug effects, Genes, Bacterial/*genetics, Membrane Transport Proteins/*genetics, Microbial Sensitivity Tests | |
34829552 | CO2 Supercritical Fluid Extraction of Oleoresins from Sea Buckthorn Pomace: Evidence of Advanced Bioactive Profile and Selected Functionality. | Mihalcea L, Turturica M, Cucolea EI, Danila GM, Dumitrascu L, Coman G, Constantin OE, Grigore-Gurgu L, Stanciuc N | Antioxidants (Basel) | 10.3390/antiox10111681 | 2021 | |||
35097270 | Ciprofloxacin-Tethered 1,2,3-Triazole Conjugates: New Quinolone Family Compounds to Upgrade Our Antiquated Approach against Bacterial Infections. | Agarwal A, Singh P, Maurya A, Patel UK, Singh A, Nath G | ACS Omega | 10.1021/acsomega.1c05303 | 2022 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9190 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30187) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-30187 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
36187 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10783 | ||||
46130 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 14551) | https://www.ccug.se/strain?id=14551 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68368 | Automatically annotated from API 20E | |||||
68369 | Automatically annotated from API 20NE | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
69923 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID92094.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
120008 | Curators of the CIP | Collection of Institut Pasteur (CIP 76.14) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2076.14 |