Strain identifier

BacDive ID: 23988

Type strain: No

Species: Yersinia sp.

Strain Designation: FP 31

Strain history: <- A. Schippers, BGR <- K. Bosecker, Bundesanstalt fuer Geowissenschaften und Rohstoffe (BGR); FP 31

NCBI tax ID(s): 41315 (species)

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General

@ref: 20921

BacDive-ID: 23988

DSM-Number: 28513

keywords: Bacteria, mesophilic

description: Yersinia sp. FP 31 is a mesophilic bacterium that was isolated from effluent from manganese-ores.

NCBI tax id

  • NCBI tax id: 41315
  • Matching level: species

strain history

  • @ref: 20921
  • history: <- A. Schippers, BGR <- K. Bosecker, Bundesanstalt fuer Geowissenschaften und Rohstoffe (BGR); FP 31

doi: 10.13145/bacdive23988.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Yersinia
  • species: Yersinia sp.
  • full scientific name: Yersinia van Loghem 1944 (Approved Lists 1980)

@ref: 20921

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Yersiniaceae

genus: Yersinia

species: Yersinia sp.

full scientific name: Yersinia sp.

strain designation: FP 31

type strain: no

Morphology

multimedia

  • @ref: 20921
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_28513.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 20921
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 20921
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose+fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol+fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan+energy source
6836816199urea+hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole+

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease+3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
20921+--+--+-+--++++-++++-

Isolation, sampling and environmental information

isolation

  • @ref: 20921
  • sample type: effluent from manganese-ores
  • geographic location: Vatra Dornei
  • country: Romania
  • origin.country: ROU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Contamination#Heavy metal
#Engineered#Other#Mine
#Engineered#Waste#Wastewater

External links

@ref: 20921

culture collection no.: DSM 28513

straininfo link

  • @ref: 87963
  • straininfo: 401700

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20921Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28513Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28513)
68368Automatically annotated from API 20E
87963Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID401700.1