Strain identifier

BacDive ID: 23980

Type strain: No

Species: Yersinia enterocolitica subsp. enterocolitica

Strain Designation: W22703pYV-, W22703pYV-

Strain history: <- T. M. Fuchs, Department Biowissenschaften, Wissenschaftszentrum Weihenstephan, Technische Universitaet Muenchen <- R. L. Goverde, Faculty of Veterinary Medicine, University of Utrecht <- G. Cornelis, Université de Louvain, Bruxelles, Belgium <- G. Wauters, Université de Louvain, Belgium

NCBI tax ID(s): 150052 (subspecies)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20920

BacDive-ID: 23980

DSM-Number: 28012

keywords: Bacteria, mesophilic

description: Yersinia enterocolitica subsp. enterocolitica W22703pYV- is a mesophilic bacterium that was isolated from human?.

NCBI tax id

  • NCBI tax id: 150052
  • Matching level: subspecies

strain history

  • @ref: 20920
  • history: <- T. M. Fuchs, Department Biowissenschaften, Wissenschaftszentrum Weihenstephan, Technische Universitaet Muenchen <- R. L. Goverde, Faculty of Veterinary Medicine, University of Utrecht <- G. Cornelis, Université de Louvain, Bruxelles, Belgium <- G. Wauters, Université de Louvain, Belgium

doi: 10.13145/bacdive23980.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Yersinia
  • species: Yersinia enterocolitica subsp. enterocolitica
  • full scientific name: Yersinia enterocolitica subsp. enterocolitica (Schleifstein and Coleman 1939) Neubauer et al. 2000

@ref: 20920

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Yersiniaceae

genus: Yersinia

species: Yersinia enterocolitica subsp. enterocolitica

full scientific name: Yersinia enterocolitica subsp. enterocolitica (Schleifstein and Coleman 1939) Neubauer et al. 2000

strain designation: W22703pYV-, W22703pYV-

type strain: no

Morphology

multimedia

  • @ref: 20920
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_28012.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 20920
  • name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/535
  • composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

culture temp

  • @ref: 20920
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol+fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan+energy source
6836816199urea+hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis
6837217754glycerol+assimilation
6837217113erythritol-assimilation
6837217108D-arabinose-assimilation
6837230849L-arabinose+assimilation
6837216988D-ribose+assimilation
6837265327D-xylose+assimilation
6837265328L-xylose-assimilation
6837215963ribitol-assimilation
6837274863methyl beta-D-xylopyranoside-assimilation
6837212936D-galactose+assimilation
6837217634D-glucose+assimilation
6837215824D-fructose+assimilation
6837216024D-mannose+assimilation
6837217266L-sorbose+assimilation
6837262345L-rhamnose-assimilation
6837216813galactitol-assimilation
6837217268myo-inositol+assimilation
6837216899D-mannitol+assimilation
6837230911sorbitol+assimilation
6837243943methyl alpha-D-mannoside-assimilation
68372320061methyl alpha-D-glucopyranoside-assimilation
6837259640N-acetylglucosamine+assimilation
6837227613amygdalin-assimilation
6837218305arbutin+assimilation
683724853esculin+assimilation
6837217814salicin-assimilation
6837217057cellobiose+assimilation
6837217306maltose+assimilation
6837217716lactose-assimilation
6837228053melibiose-assimilation
6837217992sucrose+assimilation
6837227082trehalose+assimilation
6837215443inulin-assimilation
683726731melezitose-assimilation
6837216634raffinose-assimilation
6837228017starch-assimilation
6837228087glycogen-assimilation
6837217151xylitol-assimilation
6837228066gentiobiose+assimilation
6837232528turanose-assimilation
6837262318D-lyxose-assimilation
6837216443D-tagatose-assimilation
6837228847D-fucose-assimilation
6837218287L-fucose-assimilation
6837218333D-arabitol-assimilation
6837218403L-arabitol-assimilation
6837224265gluconate+assimilation
68372Potassium 2-ketogluconate-assimilation
68372Potassium 5-ketogluconate-assimilation

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinyes
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin+
6836835581indole+

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease+3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
20920+--+--+-++-++++-+-++-

API 50CHas

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
20920-+--+++---+++++--+++--+-++-++--++------+-------+--

Isolation, sampling and environmental information

isolation

  • @ref: 20920
  • sample type: human?
  • country: Belgium
  • origin.country: BEL
  • continent: Europe

isolation source categories

  • Cat1: #Host
  • Cat2: #Human

Safety information

risk assessment

  • @ref: 20920
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 20920

culture collection no.: DSM 28012

straininfo link

  • @ref: 87962
  • straininfo: 407341

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20920Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28012Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28012)
68368Automatically annotated from API 20E
68372Automatically annotated from API 50CH assim
87962Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID407341.1