Strain identifier
BacDive ID: 23923
Type strain: 
Species: Enterobacter asburiae
Strain Designation: WS 10107
Strain history: <- Bakteriologisches Institut der Sueddeutschen Versuchs- und Forschungsanstalt fuer Milchwirtschaft, Freising-Weihenstephan, Germany; WS 10107
NCBI tax ID(s): 61645 (species)
General
@ref: 20552
BacDive-ID: 23923
DSM-Number: 30058
keywords: genome sequence, Bacteria, mesophilic, motile
description: Enterobacter asburiae WS 10107 is a mesophilic, motile bacterium that was isolated from chicken.
NCBI tax id
- NCBI tax id: 61645
- Matching level: species
strain history
- @ref: 20552
- history: <- Bakteriologisches Institut der Sueddeutschen Versuchs- und Forschungsanstalt fuer Milchwirtschaft, Freising-Weihenstephan, Germany; WS 10107
doi: 10.13145/bacdive23923.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Enterobacter
- species: Enterobacter asburiae
- full scientific name: Enterobacter asburiae Brenner et al. 1988
synonyms
- @ref: 20215
- synonym: Enterobacter muelleri
@ref: 20552
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Enterobacteriaceae
genus: Enterobacter
species: Enterobacter asburiae
full scientific name: Enterobacter asburiae Brenner et al. 1988 emend. Hoffmann et al. 2005
strain designation: WS 10107
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 95.8 | |
| 69480 | 99.988 | negative |
Culture and growth conditions
culture medium
- @ref: 20552
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 20552
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.955 |
compound production
- @ref: 20552
- compound: urease
Isolation, sampling and environmental information
isolation
- @ref: 20552
- sample type: chicken
isolation source categories
- Cat1: #Host
- Cat2: #Birds
- Cat3: #Chicken
Safety information
risk assessment
- @ref: 20552
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Enterobacter asburiae strain FDAARGOS_1056
- accession: 61645.359
- assembly level: complete
- database: patric
- NCBI tax ID: 61645
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| gram-positive | no | 97.775 | no |
| anaerobic | no | 96.39 | no |
| halophile | no | 88.341 | no |
| spore-forming | no | 93.498 | no |
| glucose-util | yes | 95.876 | no |
| thermophile | no | 99.574 | yes |
| flagellated | no | 58.75 | no |
| aerobic | yes | 78.766 | no |
| motile | yes | 87.572 | no |
| glucose-ferment | yes | 92.841 | no |
External links
@ref: 20552
culture collection no.: DSM 30058
straininfo link
- @ref: 87924
- straininfo: 113618
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20552 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-30058 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30058) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 87924 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID113618.1 |