Strain identifier
BacDive ID: 23874
Type strain: 
Species: Melaminivora alkalimesophila
Culture col. no.: DSM 26006, CCTCC AB 2012024, CY 1
General
@ref: 21340
BacDive-ID: 23874
DSM-Number: 26006
keywords: Bacteria, 16S sequence, genome sequence, mesophilic
description: Melaminivora alkalimesophila DSM 26006 is a mesophilic bacterium that was isolated from wastewater sludge of a melamine-producing factory.
strain history: <- L. Jiangwei, Chinese Academy of Science, Inst. of Urban Environment and Health, China; CY1 <- H. Wang, Chinese Academy of Sciences, Urban Environment
doi: 10.13145/bacdive23874.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/proteobacteria
- domain: Bacteria
- phylum: Proteobacteria
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Melaminivora
- species: Melaminivora alkalimesophila
- full scientific name: Melaminivora alkalimesophila Wang et al. 2014
@ref: 21340
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Melaminivora
species: Melaminivora alkalimesophila
full scientific name: Melaminivora alkalimesophila Wang et al. 2014
type strain: yes
Culture and growth conditions
culture medium
- @ref: 21340
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium830.pdf
culture temp
- @ref: 21340
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21340
- sample type: wastewater sludge of a melamine-producing factory
- geographic location: Fujian Province, Sanming city (117° 16.097' E 26° 37.193' N)
- country: China
- origin.country: CHN
- continent: Asia
- latitude: 26.6199
- longitude: 117.268
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Plant (Factory) |
| #Engineered | #Waste | #Sewage sludge |
| #Engineered | #Waste | #Wastewater |
Safety information
risk assessment
- @ref: 21340
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21340
- description: Melaminivora alkalimesophila strain CY1 16S ribosomal RNA gene, partial sequence
- accession: JQ676982
- length: 1436
- database: ena
- NCBI tax ID: 1165852
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Melaminivora alkalimesophila DSM 26006 | GCA_003182375 | scaffold | ncbi | 1165852 |
| 66792 | Melaminivora alkalimesophila CY1 | GCA_000282995 | contig | ncbi | 1165852 |
| 66792 | Melaminivora alkalimesophila strain DSM 26006 | 1165852.3 | wgs | patric | 1165852 |
| 66792 | Melaminivora alkalimesophila DSM 26006 | 2770939489 | permanent | img | 1165852 |
GC content
- @ref: 21340
- GC-content: 69.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 21340
culture collection no.: DSM 26006, CCTCC AB 2012024, CY 1
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/896772 |
| 20218 | http://www.straininfo.net/strains/896771 |
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 21340 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26006 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26006) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |