Strain identifier
BacDive ID: 23664
Type strain: 
Species: Bacillus massilioanorexius
Strain Designation: AP8
Strain history: <- J.-C. Lagier, Timone Hospital, Marseille, France; AP8 <- A. Pfleiderer
NCBI tax ID(s): 1409 (species)
version 8.1 (current version)
General
@ref: 20403
BacDive-ID: 23664
DSM-Number: 26092
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Bacillus massilioanorexius AP8 is a mesophilic bacterium that was isolated from human feces.
NCBI tax id
- NCBI tax id: 1409
- Matching level: species
strain history
- @ref: 20403
- history: <- J.-C. Lagier, Timone Hospital, Marseille, France; AP8 <- A. Pfleiderer
doi: 10.13145/bacdive23664.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus massilioanorexius
- full scientific name: Bacillus massilioanorexius Mishra et al. 2013
@ref: 20403
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus sp.
full scientific name: Bacillus sp.
strain designation: AP8
type strain: no
Culture and growth conditions
culture medium
- @ref: 20403
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
- @ref: 20403
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20403
- sample type: human feces
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
taxonmaps
- @ref: 69479
- File name: preview.99_41697.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_1256;97_1490;98_4360;99_41697&stattab=map
- Last taxonomy: Bacillus
- 16S sequence: JX101689
- Sequence Identity:
- Total samples: 94
- soil counts: 31
- aquatic counts: 6
- animal counts: 53
- plant counts: 4
Sequence information
16S sequences
- @ref: 20403
- description: Bacillus massilioanorexius AP8 16S ribosomal RNA gene, partial sequence
- accession: JX101689
- length: 1514
- database: ena
- NCBI tax ID: 1211814
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Bacillus sp. AP8 | GCA_000321185 | contig | ncbi | 1513284 |
| 66792 | Bacillus sp. AP8 | 1211814.3 | wgs | patric | 1211814 |
GC content
- @ref: 20403
- GC-content: 34.1
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 87.956 | no |
| gram-positive | yes | 91.003 | no |
| anaerobic | no | 94.579 | no |
| aerobic | yes | 56.223 | no |
| halophile | no | 85.127 | no |
| spore-forming | yes | 94.859 | no |
| thermophile | no | 96.874 | no |
| glucose-util | yes | 83.916 | no |
| glucose-ferment | no | 86.019 | no |
| flagellated | yes | 83.134 | no |
External links
@ref: 20403
culture collection no.: DSM 26092, CSUR P201
straininfo link
- @ref: 87724
- straininfo: 402904
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20403 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26092 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26092) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 87724 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402904.1 |