Strain identifier
BacDive ID: 23575
Type strain: 
Species: Marinobacter persicus
Strain Designation: M9, M9B
Strain history: <- M. A. Amoozegar, Univ. Tehran, Iran; M9 (the strain designation given in the publication is M9B) <- M. Bagheri
NCBI tax ID(s): 930118 (species)
version 8.1 (current version)
General
@ref: 21158
BacDive-ID: 23575
DSM-Number: 24014
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Marinobacter persicus M9 is a mesophilic bacterium that was isolated from salt lake.
NCBI tax id
- NCBI tax id: 930118
- Matching level: species
strain history
- @ref: 21158
- history: <- M. A. Amoozegar, Univ. Tehran, Iran; M9 (the strain designation given in the publication is M9B) <- M. Bagheri
doi: 10.13145/bacdive23575.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Alteromonadaceae
- genus: Marinobacter
- species: Marinobacter persicus
- full scientific name: Marinobacter persicus Bagheri et al. 2013
@ref: 21158
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Alteromonadaceae
genus: Marinobacter
species: Marinobacter persicus
full scientific name: Marinobacter persicus Bagheri et al. 2013
strain designation: M9, M9B
type strain: yes
Morphology
colony morphology
- @ref: 21158
- incubation period: 3-7 days
Culture and growth conditions
culture medium
- @ref: 21158
- name: MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514b
- composition: Name: MEDIUM 514 plus additional salt (DSMZ Medium 514b; with strain-specific modifications) Composition: NaCl 40.0 g/l Agar 17.5 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 21158
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21158
- sample type: salt lake
- geographic location: Central desert, Aran-Bidgol Lake
- country: Iran
- origin.country: IRN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Lake (large) |
| #Condition | #Saline |
taxonmaps
- @ref: 69479
- File name: preview.99_20881.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_89;96_693;97_808;98_12049;99_20881&stattab=map
- Last taxonomy: Marinobacter persicus
- 16S sequence: HQ433441
- Sequence Identity:
- Total samples: 920
- soil counts: 123
- aquatic counts: 727
- animal counts: 58
- plant counts: 12
Safety information
risk assessment
- @ref: 21158
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21158
- description: Marinobacter persicus strain M9B 16S ribosomal RNA gene, partial sequence
- accession: HQ433441
- length: 1465
- database: ena
- NCBI tax ID: 930118
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Marinobacter persicus KCTC 23561 | GCA_014652295 | scaffold | ncbi | 930118 |
| 66792 | Marinobacter persicus strain KCTC 23561 | 930118.22 | wgs | patric | 930118 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 93.549 | no |
| flagellated | yes | 90.245 | no |
| gram-positive | no | 99.092 | no |
| anaerobic | no | 93.531 | no |
| aerobic | yes | 80.078 | no |
| halophile | yes | 82.811 | no |
| spore-forming | no | 94.783 | no |
| thermophile | no | 99.013 | yes |
| glucose-util | no | 60.408 | no |
| glucose-ferment | no | 89.902 | no |
External links
@ref: 21158
culture collection no.: DSM 24014, CECT 7991, IBRC-M 10445, KCTC 23561
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 23592177 | Marinobacter persicus sp. nov., a moderately halophilic bacterium from a saline lake in Iran. | Bagheri M, Amoozegar MA, Didari M, Makhdoumi-Kakhki A, Schumann P, Sproer C, Sanchez-Porro C, Ventosa A | Antonie Van Leeuwenhoek | 10.1007/s10482-013-9923-3 | 2013 | Base Composition, Base Sequence, DNA, Bacterial/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Iran, Lakes, Lipids/analysis, Marinobacter/classification/genetics/growth & development/*isolation & purification/metabolism, Molecular Sequence Data, Phenotype, Phylogeny, Quinones/analysis, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Salinity, Sequence Alignment, Sequence Homology, Nucleic Acid, Species Specificity, Temperature, *Water Microbiology | Genetics |
| Phylogeny | 28792369 | Marinobacter aquaticus sp. nov., a moderately halophilic bacterium from a solar saltern. | Leon MJ, Sanchez-Porro C, Ventosa A | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001984 | 2017 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Marinobacter/*classification/genetics/isolation & purification, Nucleic Acid Hybridization, *Phylogeny, Ponds/*microbiology, RNA, Ribosomal, 16S/genetics, *Salinity, Sequence Analysis, DNA, Sodium Chloride, Spain | Transcriptome |
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 21158 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24014 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24014) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |