Strain identifier
BacDive ID: 23574
Type strain: 
Species: Marinobacter squalenivorans
Strain Designation: 2Asq64
Strain history: <- P. Bonin, Centre d’Océcanologie de Marseille—OSU, Campus de Luminy, Marseille; 2Asq64
General
@ref: 21157
BacDive-ID: 23574
DSM-Number: 15125
keywords: 16S sequence, Bacteria, psychrophilic
description: Marinobacter squalenivorans 2Asq64 is a psychrophilic bacterium that was isolated from Maribe sediment.
strain history
- @ref: 21157
- history: <- P. Bonin, Centre d’Océcanologie de Marseille—OSU, Campus de Luminy, Marseille; 2Asq64
doi: 10.13145/bacdive23574.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Alteromonadaceae
- genus: Marinobacter
- species: Marinobacter squalenivorans
- full scientific name: Marinobacter squalenivorans Rontani et al. 2003
@ref: 21157
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Alteromonadaceae
genus: Marinobacter
species: Marinobacter squelenovorans
full scientific name: Marinobacter squelenovorans
strain designation: 2Asq64
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 21157 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| 21157 | BHA (DSMZ Medium 1540) | yes | https://mediadive.dsmz.de/medium/1540 | Name: BHA MEDIUM (DSMZ Medium 1540) Composition: Agar 15.0 g/l NaCl 11.7 g/l MgSO4 x 7 H2O 7.84 g/l Tris HCl 6.0 g/l Bacto peptone 5.0 g/l Yeast extract 5.0 g/l NH4Cl 3.0 g/l KCl 0.74 g/l CaCl2 0.15 g/l Distilled water |
culture temp
- @ref: 21157
- growth: positive
- type: growth
- temperature: 20
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 21157
- sample type: Maribe sediment
- geographic location: Gulf of Fos, Meditteranean Sea
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
Sequence information
16S sequences
- @ref: 21157
- description: Marinobacter sp. 2Asq64 partial 16S rRNA gene, strain 2Asq64
- accession: AJ439500
- length: 1488
- database: ena
- NCBI tax ID: 190514
External links
@ref: 21157
culture collection no.: DSM 15125
literature
- topic: Phylogeny
- Pubmed-ID: 12839795
- title: Production of a polyunsaturated isoprenoid wax ester during aerobic metabolism of squalene by Marinobacter squalenivorans sp. nov.
- authors: Rontani JF, Mouzdahir A, Michotey V, Caumette P, Bonin P
- journal: Appl Environ Microbiol
- DOI: 10.1128/AEM.69.7.4167-4176.2003
- year: 2003
- mesh: Aerobiosis, DNA, Ribosomal/analysis, Esters/chemistry/*metabolism, Fatty Acids, Unsaturated/metabolism, Gammaproteobacteria/classification/genetics/*growth & development/*metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/microbiology, Sequence Analysis, DNA, Squalene/*metabolism, Waxes/chemistry/*metabolism
- topic2: Metabolism
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21157 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-15125 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15125) |